RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 HOXD10P28358 340 aa14.42□□□□□ -0.1
HCFC2-202ENST00000544223 PCBP1Q15365 356 aaKnown RBP eCLIP14.42□□□□□ -0.1
HCFC2-202ENST00000544223 JAMLQ86YT9 394 aa14.42□□□□□ -0.1
HCFC2-202ENST00000544223 RHOT1Q8IXI2 618 aa14.42□□□□□ -0.1
HCFC2-202ENST00000544223 LRRC4CQ9HCJ2 640 aa14.42□□□□□ -0.1
HCFC2-202ENST00000544223 HMX1Q9NP08 348 aaPredicted RBP14.42□□□□□ -0.1
HCFC2-202ENST00000544223 TMEM30AQ9NV96 361 aa14.42□□□□□ -0.1
HCFC2-202ENST00000544223 HCSTQ9UBK5 93 aa14.42□□□□□ -0.1
HCFC2-202ENST00000544223 CHD7Q9P2D1 2997 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 LRRD1A4D1F6 860 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 GPR182O15218 404 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 CD4P01730 458 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 GGCXP38435 758 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 CACNA2D1P54289 1103 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 GLE1Q53GS7 698 aaKnown RBP14.41□□□□□ -0.1
HCFC2-202ENST00000544223 HSPH1Q92598 858 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 PEBP4Q96S96 227 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 GPATCH2LQ9NWQ4 482 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 XIRP2A4UGR9 3374 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 GOLGA6L10A0A0M3HER8 536 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 SIGLEC16A6NMB1 481 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 CCDC188H7C350 402 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 PODXLO00592 558 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 PAPSS1O43252 624 aaPredicted RBP14.41□□□□□ -0.1
HCFC2-202ENST00000544223 FKTNO75072 461 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 PHF2O75151 1096 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 STAU1O95793 577 aaKnown RBP14.41□□□□□ -0.1
HCFC2-202ENST00000544223 CST5P28325 142 aaPredicted RBP14.41□□□□□ -0.1
HCFC2-202ENST00000544223 PTGIRP43119 386 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 NDUFV1P49821 464 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 MDH1BQ5I0G3 518 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 TAB3Q8N5C8 712 aaPredicted RBP14.41□□□□□ -0.1
HCFC2-202ENST00000544223 OR2W6PQ8NHA6 318 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 SENP8Q96LD8 212 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 TTC3P53804 2025 aa14.41□□□□□ -0.1
HCFC2-202ENST00000544223 AGPSO00116 658 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 MAP3K6O95382 1288 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 SLC1A1P43005 524 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 NRLP54845 237 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 PLTPP55058 493 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 PKDCCQ504Y2 493 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 CCDC33Q8N5R6 958 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 GLIS1Q8NBF1 620 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 RXFP2Q8WXD0 754 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 PWWP2AQ96N64 755 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 DEFB118Q96PH6 123 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 KCNK16Q96T55 309 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 OSBPL8Q9BZF1 889 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 DNAJC17Q9NVM6 304 aaKnown RBP14.4□□□□□ -0.1
HCFC2-202ENST00000544223 SYNJ2BP-COX16A0A087WUM0 186 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 B3GAT3O94766 335 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 PDGFRAP16234 1089 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 COILP38432 576 aaPredicted RBP14.4□□□□□ -0.1
HCFC2-202ENST00000544223 RPL21P46778 160 aaKnown RBP14.4□□□□□ -0.1
HCFC2-202ENST00000544223 GATMP50440 423 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 BCAR1P56945 870 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 MMRN1Q13201 1228 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 TIGD5Q53EQ6 642 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 SCYL2Q6P3W7 929 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 TRAF7Q6Q0C0 670 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 ZNF280BQ86YH2 543 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 B3GALNT2Q8NCR0 500 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 STKLD1Q8NE28 680 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 SLC35F5Q8WV83 523 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 LINC01599Q8WXQ3 324 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 KHSRPQ92945 711 aaKnown RBP eCLIP14.4□□□□□ -0.1
HCFC2-202ENST00000544223 CCDC114Q96M63 670 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 SLITRK1Q96PX8 696 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 TMEM209Q96SK2 561 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 COX16Q9P0S2 106 aa14.4□□□□□ -0.1
HCFC2-202ENST00000544223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.4□□□□□ -0.1
HCFC2-202ENST00000544223 KIAA0100Q14667 2235 aaKnown RBP14.4□□□□□ -0.1
HCFC2-202ENST00000544223 TDRD15B5MCY1 1934 aaKnown RBP14.39□□□□□ -0.11
HCFC2-202ENST00000544223 MYBPHLA2RUH7 354 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 FSCN2O14926 492 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 ETS1P14921 441 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 MIPP30301 263 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 NKX3-2P78367 333 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 SLC25A11Q02978 314 aaKnown RBP14.39□□□□□ -0.11
HCFC2-202ENST00000544223 PTK7Q13308 1070 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 SV2CQ496J9 727 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 PAQR9Q6ZVX9 377 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 FUKQ8N0W3 1084 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 CCDC26Q8TAB7 109 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 MCRS1Q96EZ8 462 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 ZNF560Q96MR9 790 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 GDAP2Q9NXN4 497 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 DDX43Q9NXZ2 648 aaKnown RBP14.39□□□□□ -0.11
HCFC2-202ENST00000544223 CALCOCO1Q9P1Z2 691 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 PQBP1O60828 265 aaKnown RBP14.39□□□□□ -0.11
HCFC2-202ENST00000544223 ZSCAN5DPP0CG00 497 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 MAP2K2P36507 400 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 EPHB4P54760 987 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 PITX1P78337 314 aaPredicted RBP14.39□□□□□ -0.11
HCFC2-202ENST00000544223 SKIDA1Q1XH10 827 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 TCTN1Q2MV58 587 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 MAP9Q49MG5 647 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 OLFML1Q6UWY5 402 aa14.39□□□□□ -0.11
HCFC2-202ENST00000544223 MAATS1Q7Z4T9 603 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms