RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 DDX6P26196 483 aaKnown RBP eCLIP14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAGEA9P43362 315 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CACNA2D1P54289 1103 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 USP46P62068 366 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TRPC3Q13507 836 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NCOA4Q13772 614 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ARHGAP29Q52LW3 1261 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAMSTRQ6ZN01 415 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 C4orf50Q6ZRC1 276 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CELF5Q8N6W0 485 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAB21L3Q8N8X9 362 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TMC2Q8TDI7 906 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SYAP1Q96A49 352 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CEP295NLQ96MC4 621 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SLC22A12Q96S37 553 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SDCBP2Q9H190 292 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SMYD3Q9H7B4 428 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GTSE1Q9NYZ3 720 aa14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAGEC2Q9UBF1 373 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NXF1Q9UBU9 619 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAGED2Q9UNF1 606 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MRPS17Q9Y2R5 130 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CALUO43852 315 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 AKAP3O75969 853 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CHRNB1P11230 501 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CCNE1P24864 410 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SOX9P48436 509 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TNNC1P63316 161 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NUCB2P80303 420 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TNK2Q07912 1038 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF268Q14587 947 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MAPRE1Q15691 268 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MDH1BQ5I0G3 518 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TXNDC11Q6PKC3 985 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PAQR9Q6ZVX9 377 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SV2AQ7L0J3 742 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SCN4BQ8IWT1 228 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 YAF2Q8IY57 180 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 OR6B3Q8NGW1 331 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 BPIFB1Q8TDL5 484 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 FAM3CQ92520 227 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NELL1Q92832 810 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CHFRQ96EP1 664 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GCNAQ96QF7 691 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CYP2S1Q96SQ9 504 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TTLL2Q9BWV7 592 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 B3GNT5Q9BYG0 378 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CHRDQ9H2X0 955 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SNX25Q9H3E2 840 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GCNT4Q9P109 453 aa13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 UXTQ9UBK9 157 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-215ENST00000543359 OTOL1A6NHN0 477 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 DPYSL4O14531 572 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NCAM2O15394 837 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PHACTR2O75167 634 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ASS1P00966 412 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TDGF1P13385 188 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GRIK1P39086 918 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 RAP1GAPP47736 663 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CYP27A1Q02318 531 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ENPEPQ07075 957 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MTAPQ13126 283 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 BIRC3Q13489 604 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PNOCQ13519 176 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GAS6Q14393 721 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF528Q3MIS6 628 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SMYD4Q8IYR2 804 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 B3GALNT2Q8NCR0 500 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SPATA20Q8TB22 786 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CSGALNACT1Q8TDX6 532 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MRPS31Q92665 395 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NKD2Q969F2 451 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 C8orf48Q96LL4 319 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF518BQ9C0D4 1074 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 C8orf33Q9H7E9 229 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 LMAN1LQ9HAT1 526 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 HPS4Q9NQG7 708 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TDP1Q9NUW8 608 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SPATA6Q9NWH7 488 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 FBXO4Q9UKT5 387 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NDRG2Q9UN36 371 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 R4GN57 208 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CEP250Q9BV73 2442 aa13.98□□□□□ -0.17
TNFRSF1A-215ENST00000543359 C2orf78A6NCI8 922 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 A8MXQ7 604 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 F8VP50 259 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SPECC1L-ADORA2AF8WAN1 911 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 KIF20AO95235 890 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NR2F2P24468 414 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CTHP32929 405 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 AVPR1AP37288 418 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 NOP14P78316 857 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZXDBP98169 803 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PPP3CAQ08209 521 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SGSM1Q2NKQ1 1148 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF667Q5HYK9 610 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CEP135Q66GS9 1140 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 DENND5BQ6ZUT9 1274 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms