RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 VSNL1P62760 191 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 GPNMBQ14956 572 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 C1orf53Q5VUE5 145 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 TMEM110Q86TL2 294 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 ZDHHC17Q8IUH5 632 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 URGCPQ8TCY9 931 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 HNRNPABQ99729 332 aaKnown RBP9.83□□□□□ -0.84
GNE-206ENST00000543356 SLITRK6Q9H5Y7 841 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 METTL5Q9NRN9 209 aaKnown RBP9.83□□□□□ -0.84
GNE-206ENST00000543356 TMEM161AQ9NX61 479 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 INPP5FQ9Y2H2 1132 aa9.83□□□□□ -0.84
GNE-206ENST00000543356 GOLGA6L10A0A0M3HER8 536 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 ARHGEF37A1IGU5 675 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 E5RJQ4 531 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 CYP11A1P05108 521 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 IGFBP6P24592 240 aaPredicted RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 RFC1P35251 1148 aaPredicted RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 TAS2R40P59535 323 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 CLLU1OSQ5K130 101 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 DCLRE1AQ6PJP8 1040 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 CD300LGQ6UXG3 332 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 SLC39A5Q6ZMH5 540 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 FAM183BPQ6ZVS7 135 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 C10orf67Q8IYJ2 551 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 JOSD2Q8TAC2 188 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 SLC2A14Q8TDB8 520 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 SEPT8Q92599 483 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 ZNF333Q96JL9 665 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 TOX2Q96NM4 488 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 KRT12Q99456 494 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 PAAF1Q9BRP4 392 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 DDX43Q9NXZ2 648 aaKnown RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 DSEQ9UL01 958 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 M0QZQ0 153 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 PQBP1O60828 265 aaKnown RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 ERLIN1O75477 346 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 MYCP01106 439 aaPredicted RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 PTPN1P18031 435 aaKnown RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 TNFRSF8P28908 595 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 ADORA2BP29275 332 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 SCNN1AP37088 669 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 PLA2G4AP47712 749 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 DSC1Q08554 894 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 ACAP1Q15027 740 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 TIGD5Q53EQ6 642 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 NOMO2Q5JPE7 1267 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 FAM102AQ5T9C2 384 aaPredicted RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 PMF1Q6P1K2 205 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 CC2D1AQ6P1N0 951 aaPredicted RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 TMCO3Q6UWJ1 677 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 CTU1Q7Z7A3 348 aaKnown RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 SLC13A5Q86YT5 568 aaPredicted RBP9.82□□□□□ -0.84
GNE-206ENST00000543356 SGSM3Q96HU1 749 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 LPIN3Q9BQK8 851 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 AP1M1Q9BXS5 423 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.82□□□□□ -0.84
GNE-206ENST00000543356 STIM2Q9P246 746 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 KANSL3Q9P2N6 904 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 CDH9Q9ULB4 789 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 USTQ9Y2C2 406 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 CENPFP49454 3210 aa9.82□□□□□ -0.84
GNE-206ENST00000543356 PCNTO95613 3336 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 TMEM189-UBE2V1I3L0A0 370 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 XPO1O14980 1071 aaKnown RBP9.81□□□□□ -0.84
GNE-206ENST00000543356 CXCL10P02778 98 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 PSMA2P25787 234 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 TKTP29401 623 aaKnown RBP9.81□□□□□ -0.84
GNE-206ENST00000543356 ACADSBP45954 432 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 PLCB3Q01970 1234 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 AADACL2Q6P093 401 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 FBXO46Q6PJ61 603 aaPredicted RBP9.81□□□□□ -0.84
GNE-206ENST00000543356 OLFML1Q6UWY5 402 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 POLNQ7Z5Q5 900 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 FUKQ8N0W3 1084 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 EXD1Q8NHP7 514 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 ARMC5Q96C12 935 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 HSFY1Q96LI6 401 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 SYT15Q9BQS2 421 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.81□□□□□ -0.84
GNE-206ENST00000543356 MYO1CO00159 1063 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 DPYSL4O14531 572 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 ENPP3O14638 875 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 B3GAT3O94766 335 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 IBSPP21815 317 aaPredicted RBP9.81□□□□□ -0.84
GNE-206ENST00000543356 PCSK1P29120 753 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 RGS7P49802 495 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 SLC6A3Q01959 620 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 KIAA0319Q5VV43 1072 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 DAB2IPQ5VWQ8 1189 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 OR6B2Q6IFH4 312 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 METTL23Q86XA0 190 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 KLHL7Q8IXQ5 586 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 DBF4BQ8NFT6 615 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 MAIP1Q8WWC4 291 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 RSPH1Q8WYR4 309 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 SUSD3Q96L08 255 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 DUSP16Q9BY84 665 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 CRTAC1Q9NQ79 661 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 DDX56Q9NY93 547 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms