RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 SNX16P57768 344 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 PDCLQ13371 301 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 IPO4Q8TEX9 1081 aaKnown RBP11.28□□□□□ -0.6
DDB1-221ENST00000543162 STK32AQ8WU08 396 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 SLC35F5Q8WV83 523 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 MIS12Q9H081 205 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 ST7Q9NRC1 585 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 MRPL17Q9NRX2 175 aaKnown RBP11.28□□□□□ -0.6
DDB1-221ENST00000543162 MYO1AQ9UBC5 1043 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 CNOT8Q9UFF9 292 aaKnown RBP11.28□□□□□ -0.6
DDB1-221ENST00000543162 CYTH4Q9UIA0 394 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 GUCA1BQ9UMX6 200 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 PCDHB5Q9Y5E4 795 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 DUSP10Q9Y6W6 482 aa11.28□□□□□ -0.6
DDB1-221ENST00000543162 NLRC5Q86WI3 1866 aa11.27□□□□□ -0.6
DDB1-221ENST00000543162 MYH10P35580 1976 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 A0A0A6YYK5 440 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 MACROD2A1Z1Q3 448 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 BTNL10A8MVZ5 291 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 TULP2O00295 520 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 XPO1O14980 1071 aaKnown RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 ZNF500O60304 480 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 ABL1P00519 1130 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 CYP1A2P05177 515 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 CA3P07451 260 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 RPL17P18621 184 aaKnown RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 BDNFP23560 247 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 DNAJB2P25686 324 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 NOP2P46087 812 aaKnown RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 RGS7P49802 495 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 NAP1L1P55209 391 aaKnown RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 MAP3K7CLP57077 242 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 CREMQ03060 361 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 SMARCB1Q12824 385 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 PTP4A2Q12974 167 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 GPR17Q13304 367 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 PTPN20Q4JDL3 420 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 C2CD6Q53TS8 623 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 SLC8B1Q6J4K2 584 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 PMF1Q6P1K2 205 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 RSPO2Q6UXX9 243 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 CLEC20AQ6ZU45 233 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 GPR65Q8IYL9 337 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 RFFLQ8WZ73 363 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 C18orf8Q96DM3 657 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 ARHGEF26Q96DR7 871 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 FUBP3Q96I24 572 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDB1-221ENST00000543162 SAMD11Q96NU1 681 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 C17orf80Q9BSJ5 609 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 C11orf84Q9BUA3 381 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 RHOBTB2Q9BYZ6 727 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 ZBP1Q9H171 429 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 DMAP1Q9NPF5 467 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 AVENQ9NQS1 362 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 ABI2Q9NYB9 513 aaPredicted RBP11.27□□□□□ -0.61
DDB1-221ENST00000543162 MSRAQ9UJ68 235 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 MTUS1Q9ULD2 1270 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 LZTS1Q9Y250 596 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 SSX2IPQ9Y2D8 614 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 PAXBP1Q9Y5B6 917 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 NCANO14594 1321 aa11.27□□□□□ -0.61
DDB1-221ENST00000543162 GBF1Q92538 1859 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 C5orf67F2Z3F1 127 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 ADAM12O43184 909 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 KIF5CO60282 957 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 BEST1O76090 585 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 ARHGEF15O94989 841 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 ERBB2P04626 1255 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 RB1P06400 928 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 CTSAP10619 480 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 RRM1P23921 792 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 BMP8BP34820 402 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 OR1D2P34982 312 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 CA8P35219 290 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 ACADSBP45954 432 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 PLA2G4AP47712 749 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 GABRB2P47870 512 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 RGS19P49795 217 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 ROR1Q01973 937 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 RAB30Q15771 203 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 IFI16Q16666 785 aaKnown RBP11.26□□□□□ -0.61
DDB1-221ENST00000543162 CFAP221Q4G0U5 840 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 TMC7Q7Z402 723 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 PHLDB2Q86SQ0 1253 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 PIGZQ86VD9 579 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 RHOT2Q8IXI1 618 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 RNF10Q8N5U6 811 aaKnown RBP11.26□□□□□ -0.61
DDB1-221ENST00000543162 SLC35G2Q8TBE7 412 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 C2orf15Q8WU43 125 aaKnown RBP11.26□□□□□ -0.61
DDB1-221ENST00000543162 AUTS2Q8WXX7 1259 aa11.26□□□□□ -0.61
DDB1-221ENST00000543162 HSFY1Q96LI6 401 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms