RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 CLDN23Q96B33 292 aa17.71■□□□□ 0.43
PTPN6-221ENST00000543120 TRMT2BQ96GJ1 504 aaKnown RBP17.71■□□□□ 0.43
PTPN6-221ENST00000543120 GCNAQ96QF7 691 aa17.71■□□□□ 0.43
PTPN6-221ENST00000543120 SLC22A12Q96S37 553 aa17.71■□□□□ 0.43
PTPN6-221ENST00000543120 OSBPL6Q9BZF3 934 aa17.71■□□□□ 0.43
PTPN6-221ENST00000543120 ZNF518BQ9C0D4 1074 aa17.71■□□□□ 0.43
PTPN6-221ENST00000543120 OBP2AQ9NY56 170 aa17.71■□□□□ 0.43
PTPN6-221ENST00000543120 PIAS3Q9Y6X2 628 aa17.71■□□□□ 0.43
PTPN6-221ENST00000543120 GADD45BO75293 160 aaPredicted RBP17.7■□□□□ 0.42
PTPN6-221ENST00000543120 HLA-DRAP01903 254 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 CCNE1P24864 410 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 PMS1P54277 932 aaKnown RBP17.7■□□□□ 0.42
PTPN6-221ENST00000543120 MCCD1P59942 119 aaPredicted RBP17.7■□□□□ 0.42
PTPN6-221ENST00000543120 TNK2Q07912 1038 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 VSTM1Q6UX27 236 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 PAQR9Q6ZVX9 377 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 FRMD5Q7Z6J6 570 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 FAM186BQ8IYM0 893 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 B3GALNT2Q8NCR0 500 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 BPIFB1Q8TDL5 484 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 FAM3CQ92520 227 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 SPATA17Q96L03 361 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 NELL2Q99435 816 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 APOBEC3GQ9HC16 384 aaKnown RBP17.7■□□□□ 0.42
PTPN6-221ENST00000543120 GTSE1Q9NYZ3 720 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 NDRG2Q9UN36 371 aaKnown RBP17.7■□□□□ 0.42
PTPN6-221ENST00000543120 MYO15AQ9UKN7 3530 aa17.7■□□□□ 0.42
PTPN6-221ENST00000543120 DMDP11532 3685 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 PROB1E7EW31 1015 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 F8VP50 259 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 ASS1P00966 412 aaKnown RBP17.69■□□□□ 0.42
PTPN6-221ENST00000543120 DDX6P26196 483 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTPN6-221ENST00000543120 RPL13P26373 211 aaKnown RBP17.69■□□□□ 0.42
PTPN6-221ENST00000543120 PSMC2P35998 433 aaKnown RBP17.69■□□□□ 0.42
PTPN6-221ENST00000543120 NBL1P41271 181 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 ORC1Q13415 861 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 WDR44Q5JSH3 913 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 ZNF658Q5TYW1 1059 aaPredicted RBP17.69■□□□□ 0.42
PTPN6-221ENST00000543120 ISM2Q6H9L7 571 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 CELF5Q8N6W0 485 aaKnown RBP17.69■□□□□ 0.42
PTPN6-221ENST00000543120 TAS1R2Q8TE23 839 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 MRPS31Q92665 395 aaKnown RBP17.69■□□□□ 0.42
PTPN6-221ENST00000543120 C8orf48Q96LL4 319 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 TIGD1Q96MW7 591 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 GSDMAQ96QA5 445 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 BCO2Q9BYV7 579 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 GKN1Q9NS71 199 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 UXTQ9UBK9 157 aaPredicted RBP17.69■□□□□ 0.42
PTPN6-221ENST00000543120 HMGXB4Q9UGU5 601 aa17.69■□□□□ 0.42
PTPN6-221ENST00000543120 C2orf78A6NCI8 922 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 OTOL1A6NHN0 477 aaPredicted RBP17.68■□□□□ 0.42
PTPN6-221ENST00000543120 MAN2B1O00754 1011 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 AVPR1AP37288 418 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 ASPAP45381 313 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 EDRF1Q3B7T1 1238 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 ARHGAP29Q52LW3 1261 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 INTS8Q75QN2 995 aaKnown RBP17.68■□□□□ 0.42
PTPN6-221ENST00000543120 ACOT1Q86TX2 421 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 CCDC34Q96HJ3 373 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 KCNK16Q96T55 309 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 FAM83CQ9BQN1 747 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 MMRN2Q9H8L6 949 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 TRPC7Q9HCX4 862 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 TDP1Q9NUW8 608 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 SPATA6Q9NWH7 488 aaPredicted RBP17.68■□□□□ 0.42
PTPN6-221ENST00000543120 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 GCNT4Q9P109 453 aa17.68■□□□□ 0.42
PTPN6-221ENST00000543120 SOBPA7XYQ1 873 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 TRIM66O15016 1216 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 CLSTN1O94985 981 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 SP9P0CG40 484 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 KRT13P13646 458 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 PIK3CAP42336 1068 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 KPNA1P52294 538 aaPredicted RBP17.67■□□□□ 0.42
PTPN6-221ENST00000543120 MLLT6P55198 1093 aaPredicted RBP17.67■□□□□ 0.42
PTPN6-221ENST00000543120 COBLL1Q53SF7 1204 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 TRIM68Q6AZZ1 485 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 TXNDC11Q6PKC3 985 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 DENND5BQ6ZUT9 1274 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 ASCL5Q7RTU5 278 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 ADSSL1Q8N142 457 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 ARL14EPQ8N8R7 260 aaPredicted RBP17.67■□□□□ 0.42
PTPN6-221ENST00000543120 CSGALNACT1Q8TDX6 532 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 TAF4BQ92750 862 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 SEMA4DQ92854 862 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 SMARCE1Q969G3 411 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 LMAN1LQ9HAT1 526 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 MRPS17Q9Y2R5 130 aaKnown RBP17.67■□□□□ 0.42
PTPN6-221ENST00000543120 USP34Q70CQ2 3546 aa17.67■□□□□ 0.42
PTPN6-221ENST00000543120 CACNA1HO95180 2353 aa17.66■□□□□ 0.42
PTPN6-221ENST00000543120 SMC2O95347 1197 aa17.66■□□□□ 0.42
PTPN6-221ENST00000543120 CHRNB1P11230 501 aa17.66■□□□□ 0.42
PTPN6-221ENST00000543120 CD44P16070 742 aaKnown RBP17.66■□□□□ 0.42
PTPN6-221ENST00000543120 ANXA13P27216 316 aa17.66■□□□□ 0.42
PTPN6-221ENST00000543120 RPS9P46781 194 aaKnown RBP17.66■□□□□ 0.42
PTPN6-221ENST00000543120 NDST1P52848 882 aa17.66■□□□□ 0.42
PTPN6-221ENST00000543120 ZXDBP98169 803 aa17.66■□□□□ 0.42
PTPN6-221ENST00000543120 ENPEPQ07075 957 aa17.66■□□□□ 0.42
PTPN6-221ENST00000543120 MTAPQ13126 283 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms