RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 STK32AQ8WU08 396 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 TEKT4Q8WW24 435 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 CCDC97Q96F63 343 aaPredicted RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 CLMNQ96JQ2 1002 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 OLFM3Q96PB7 478 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 UPF3AQ9H1J1 476 aaKnown RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 MYOZ2Q9NPC6 264 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 A1CFQ9NQ94 594 aaKnown RBP8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 SLC5A4Q9NY91 659 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 USP18Q9UMW8 372 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 STXBP5LQ9Y2K9 1186 aa8.56□□□□□ -1.04
PRKAB1-207ENST00000542698 ATP9BO43861 1147 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 TXNP10599 105 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 BGNP21810 368 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 ELK3P41970 407 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 DYNC1I2Q13409 638 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SEPT6Q14141 434 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 PRAMEF18Q5VWM3 479 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 DAB2IPQ5VWQ8 1189 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 MTHFD1LQ6UB35 978 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 C4orf22Q6V702 233 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 FAM83AQ86UY5 434 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 PIK3R5Q8WYR1 880 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SEMA4DQ92854 862 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 MIEF2Q96C03 454 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 HPDLQ96IR7 371 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 RNPEPL1Q9HAU8 725 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 PFDN4Q9NQP4 134 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 AFG3L2Q9Y4W6 797 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 BAZ2AQ9UIF9 1905 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 ITGB3P05106 788 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 KRT16P08779 473 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 LCP1P13796 627 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 OCRLQ01968 901 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 NME3Q13232 169 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 ORC1Q13415 861 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 TRIP10Q15642 601 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 KYAT1Q16773 422 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SLC45A4Q5BKX6 768 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 EFHC2Q5JST6 749 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SNX30Q5VWJ9 437 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 PRUNE1Q86TP1 453 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 WDR49Q8IV35 697 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 INPP5DQ92835 1189 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 MBOAT7Q96N66 472 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 TBC1D10AQ9BXI6 508 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 TMEM120AQ9BXJ8 343 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SMARCAD1Q9H4L7 1026 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SUDS3Q9H7L9 328 aaPredicted RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 XAB2Q9HCS7 855 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SAR1AQ9NR31 198 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 AJAP1Q9UKB5 411 aaPredicted RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SIPA1L3O60292 1781 aaPredicted RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SCN11AQ9UI33 1791 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 ROBO1Q9Y6N7 1651 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 PPP1R12AO14974 1030 aaPredicted RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 RASSF9O75901 435 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 HSPA8P11142 646 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 ETS1P14921 441 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 IREB2P48200 963 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 NCALDP61601 193 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 FKBP1AP62942 108 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 RIPK1Q13546 671 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 NBPF20Q3BBV1 942 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 JADE1Q6IE81 842 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 RWDD4Q6NW29 188 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 KLC3Q6P597 504 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 SCUBE1Q8IWY4 988 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 KCNK16Q96T55 309 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 BTBD10Q9BSF8 475 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 CNPY3Q9BT09 278 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 KIAA1683Q9H0B3 1180 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 FAM49BQ9NUQ9 324 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 ADA2Q9NZK5 511 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 DRG1Q9Y295 367 aaKnown RBP8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 RGPD5Q99666 1765 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 ADAMTS7Q9UKP4 1686 aa8.55□□□□□ -1.04
PRKAB1-207ENST00000542698 LIASO43766 372 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 ATP9AO75110 1047 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 UBTFL6P0CB48 400 aaPredicted RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 PAX7P23759 505 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 SERPINB3P29508 390 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 TCF7P36402 384 aaPredicted RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 AQP5P55064 265 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 BACE1P56817 501 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 KPNB1Q14974 876 aaKnown RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 TAF12Q16514 161 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 PDK4Q16654 411 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 ZACNQ401N2 412 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 RARS2Q5T160 578 aaKnown RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 EFCAB12Q6NXP0 572 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 PRMT7Q9NVM4 692 aaPredicted RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 GRHL1Q9NZI5 618 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 SAE1Q9UBE0 346 aaPredicted RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 UBIAD1Q9Y5Z9 338 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 COL1A1P02452 1464 aaPredicted RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 IGLV3-22A0A075B6J6 115 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 MAGEA13PA6NCF6 341 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms