RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CDR1P51861 262 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 CCDC173Q0VFZ6 552 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 DUSP6Q16828 381 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 TRIM72Q6ZMU5 477 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 CCDC149Q6ZUS6 474 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 RTL10Q7L3V2 364 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 KREMEN2Q8NCW0 462 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 SLC20A1Q8WUM9 679 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 PLEKHA4Q9H4M7 779 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 MYO9BQ13459 2157 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 M0QYV0 167 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 MMEP08473 750 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 SETSIPP0DME0 302 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 HAPLN1P10915 354 aaPredicted RBP24.46■■□□□ 1.51
HOMER3-205ENST00000542541 NPR3P17342 541 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 ANXA13P27216 316 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 GRIK1P39086 918 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 RPL10AP62906 217 aaKnown RBP24.46■■□□□ 1.51
HOMER3-205ENST00000542541 BST2Q10589 180 aaKnown RBP24.46■■□□□ 1.51
HOMER3-205ENST00000542541 MGAT5BQ3V5L5 792 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 SLC22A17Q8WUG5 538 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 HDAC7Q8WUI4 952 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 DMAP1Q9NPF5 467 aaPredicted RBP24.46■■□□□ 1.51
HOMER3-205ENST00000542541 FBXW11Q9UKB1 542 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 SLC27A5Q9Y2P5 690 aa24.46■■□□□ 1.51
HOMER3-205ENST00000542541 TRIM66O15016 1216 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 VNN2O95498 520 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 LSM8O95777 96 aaKnown RBP24.45■■□□□ 1.5
HOMER3-205ENST00000542541 CHRNB2P17787 502 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 IGFBP4P22692 258 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 LIN9Q5TKA1 542 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 ZNF571Q7Z3V5 609 aaPredicted RBP24.45■■□□□ 1.5
HOMER3-205ENST00000542541 TMEM35BQ8NCS4 154 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 UBA3Q8TBC4 463 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 SEPT5Q99719 369 aaPredicted RBP24.45■■□□□ 1.5
HOMER3-205ENST00000542541 CSNK1G1Q9HCP0 422 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 SEPT11Q9NVA2 429 aaKnown RBP24.45■■□□□ 1.5
HOMER3-205ENST00000542541 ARHGAP20Q9P2F6 1191 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 MTCH2Q9Y6C9 303 aa24.45■■□□□ 1.5
HOMER3-205ENST00000542541 SSU72P8A0A1W2PR75 194 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 SEC24AO95486 1093 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 PTMAP06454 111 aaKnown RBP24.44■■□□□ 1.5
HOMER3-205ENST00000542541 SPATA31D3P0C874 917 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 FMO1Q01740 532 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 PKDCCQ504Y2 493 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 CYP26C1Q6V0L0 522 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 CLEC20AQ6ZU45 233 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 SPATA31D4Q6ZUB0 917 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 TTC30AQ86WT1 665 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 TMTC1Q8IUR5 882 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 SCN4BQ8IWT1 228 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 C8orf48Q96LL4 319 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 NOX5Q96PH1 765 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 SYT11Q9BT88 431 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 RHOBTB2Q9BYZ6 727 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 UBXN6Q9BZV1 441 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 DEF6Q9H4E7 631 aa24.44■■□□□ 1.5
HOMER3-205ENST00000542541 SSTR3P32745 418 aaPredicted RBP24.43■■□□□ 1.5
HOMER3-205ENST00000542541 ALDH1A3P47895 512 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 MAP3K7CLP57077 242 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 MAPK8IP2Q13387 824 aaPredicted RBP24.43■■□□□ 1.5
HOMER3-205ENST00000542541 PLD1Q13393 1074 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 TCEAL5Q5H9L2 206 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 DENND1BQ6P3S1 775 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 CCDC42Q96M95 316 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 CEP295NLQ96MC4 621 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 BAG1Q99933 345 aaPredicted RBP24.43■■□□□ 1.5
HOMER3-205ENST00000542541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.43■■□□□ 1.5
HOMER3-205ENST00000542541 HCFC2Q9Y5Z7 792 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 CFHP08603 1231 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 EIF4A3P38919 411 aaKnown RBP24.43■■□□□ 1.5
HOMER3-205ENST00000542541 GPD2P43304 727 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 PDE4CQ08493 712 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 ADGRE1Q14246 886 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 SECISBP2LQ93073 1101 aaKnown RBP24.43■■□□□ 1.5
HOMER3-205ENST00000542541 CHP1Q99653 195 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 SMOQ99835 787 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 CRISPLD1Q9H336 500 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 NHEJ1Q9H9Q4 299 aaPredicted RBP24.43■■□□□ 1.5
HOMER3-205ENST00000542541 PNPLA8Q9NP80 782 aa24.43■■□□□ 1.5
HOMER3-205ENST00000542541 MYO7AQ13402 2215 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 F8VP50 259 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 XPO1O14980 1071 aaKnown RBP24.42■■□□□ 1.5
HOMER3-205ENST00000542541 NCK2O43639 380 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 NRDCO43847 1150 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 PLEKP08567 350 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-205ENST00000542541 SRGAP2BP0DMP2 458 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 EPCAMP16422 314 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 FECHP22830 423 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 CDH5P33151 784 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-205ENST00000542541 PPP1R2P3Q6NXS1 205 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 PASD1Q8IV76 773 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 TTC9BQ8N6N2 239 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 STK32AQ8WU08 396 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 SLC35F5Q8WV83 523 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 PPP1R9BQ96SB3 815 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 KCNK16Q96T55 309 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 IGFLR1Q9H665 355 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 ADAMTS1Q9UHI8 967 aa24.42■■□□□ 1.5
HOMER3-205ENST00000542541 INSL5Q9Y5Q6 135 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms