RNA–Protein interactions for RNA: ENST00000542192.5

CACFD1-207, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,754 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-207ENST00000542192 PLXNB2O15031 1838 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 hCG_1818297A0A087WSY0 165 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 VIMP08670 466 aaKnown RBP16.77■□□□□ 0.28
CACFD1-207ENST00000542192 KRT3P12035 628 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 CDKN2BP42772 138 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 CAV1Q03135 178 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 SMTNL2Q2TAL5 461 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 ILDR2Q71H61 639 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.28
CACFD1-207ENST00000542192 LRRC34Q8IZ02 419 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 EMC1Q8N766 993 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 ROPN1BQ9BZX4 212 aaPredicted RBP16.77■□□□□ 0.28
CACFD1-207ENST00000542192 ZNF408Q9H9D4 720 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 ROPN1Q9HAT0 212 aaPredicted RBP16.77■□□□□ 0.28
CACFD1-207ENST00000542192 NINJ2Q9NZG7 142 aa16.77■□□□□ 0.28
CACFD1-207ENST00000542192 ZSWIM8A7E2V4 1837 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 KLHL33A6NCF5 533 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 SIGLEC16A6NMB1 481 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 FOXO6A8MYZ6 492 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 MAGEB2O15479 319 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 SNAI1O95863 264 aaPredicted RBP16.77■□□□□ 0.27
CACFD1-207ENST00000542192 ERBB2P04626 1255 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 PSMA2P25787 234 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 IL1R2P27930 398 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 POLR2BP30876 1174 aaKnown RBP16.77■□□□□ 0.27
CACFD1-207ENST00000542192 PSMC1P62191 440 aaKnown RBP16.77■□□□□ 0.27
CACFD1-207ENST00000542192 KCNT1Q5JUK3 1230 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 ARMC3Q5W041 872 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 TRIM68Q6AZZ1 485 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 MFSD5Q6N075 450 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 MTHFD1LQ6UB35 978 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 EXOC3L1Q86VI1 746 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 ANKS4BQ8N8V4 417 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 VTA1Q9NP79 307 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.77■□□□□ 0.27
CACFD1-207ENST00000542192 CTNNAL1Q9UBT7 734 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 STRIP2Q9ULQ0 834 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 ZNF148Q9UQR1 794 aa16.77■□□□□ 0.27
CACFD1-207ENST00000542192 C3orf70A6NLC5 250 aaPredicted RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 MED7O43513 233 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 CILPO75339 1184 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 SMNDC1O75940 238 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 GHRP10912 638 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 PTPN11Q06124 597 aaPredicted RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 TFDP3Q5H9I0 405 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 CROCCP2Q86T23 111 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 XYLT1Q86Y38 959 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 ATXN2LQ8WWM7 1075 aaKnown RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 NLRP7Q8WX94 980 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 CENPTQ96BT3 561 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 ZWILCHQ9H900 591 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 NOP53Q9NZM5 478 aaKnown RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 RBM47A0AV96 593 aaKnown RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 BTBD19C9JJ37 291 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 H3BRB1 525 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 LRCH4O75427 683 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 SLC25A11Q02978 314 aaKnown RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 TNFAIP2Q03169 654 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 MS4A4AQ96JQ5 239 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 C9orf72Q96LT7 481 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 TUT1Q9H6E5 874 aaKnown RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 BATF3Q9NR55 127 aa16.76■□□□□ 0.27
CACFD1-207ENST00000542192 METTL5Q9NRN9 209 aaKnown RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 SAE1Q9UBE0 346 aaPredicted RBP16.76■□□□□ 0.27
CACFD1-207ENST00000542192 MICAL2O94851 1124 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 CREB1P16220 341 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 COPS2P61201 443 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 CCNA1P78396 465 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 MARCH8Q5T0T0 291 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 MAP1SQ66K74 1059 aaPredicted RBP16.75■□□□□ 0.27
CACFD1-207ENST00000542192 DRICH1Q6PGQ1 229 aaPredicted RBP16.75■□□□□ 0.27
CACFD1-207ENST00000542192 ALLCQ8N6M5 410 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 CXCL16Q9H2A7 254 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 ASB7Q9H672 318 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 ETAA1Q9NY74 926 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 CPSF2Q9P2I0 782 aaKnown RBP16.75■□□□□ 0.27
CACFD1-207ENST00000542192 SLC12A4Q9UP95 1085 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 TSPAN1O60635 241 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 UBOX5O94941 541 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 DPH6Q7L8W6 267 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 EMID1Q96A84 441 aaPredicted RBP16.75■□□□□ 0.27
CACFD1-207ENST00000542192 HPDLQ96IR7 371 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 DDX56Q9NY93 547 aaKnown RBP16.75■□□□□ 0.27
CACFD1-207ENST00000542192 TRIM33Q9UPN9 1127 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 TRIP11Q15643 1979 aa16.75■□□□□ 0.27
CACFD1-207ENST00000542192 PTPN7P35236 360 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 ARSEP51690 589 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 TMEM132DQ14C87 1099 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 OASLQ15646 514 aaKnown RBP16.74■□□□□ 0.27
CACFD1-207ENST00000542192 SERPINB12Q96P63 405 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
CACFD1-207ENST00000542192 TMEM121Q9BTD3 319 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 KAT6AQ92794 2004 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 CITO14578 2027 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 IGF2BP3O00425 579 aaKnown RBP eCLIP16.74■□□□□ 0.27
CACFD1-207ENST00000542192 CETPP11597 493 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 DYNLT1P63172 113 aa16.74■□□□□ 0.27
CACFD1-207ENST00000542192 LMNB2Q03252 620 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms