RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 KCNE1P15382 129 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 HMGA1P17096 107 aaKnown RBP10.56□□□□□ -0.72
CHFR-220ENST00000541817 IL12RB1P42701 662 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 CSRP3P50461 194 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 TLE3Q04726 772 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 NPY5RQ15761 445 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 SMAD1Q15797 465 aaKnown RBP10.56□□□□□ -0.72
CHFR-220ENST00000541817 ZNF568Q3ZCX4 644 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 EOGTQ5NDL2 527 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 ARMCX5Q6P1M9 558 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 DHX32Q7L7V1 743 aaKnown RBP10.56□□□□□ -0.72
CHFR-220ENST00000541817 MON1AQ86VX9 555 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 C12orf40Q86WS4 652 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 SPACA3Q8IXA5 215 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 ZCCHC9Q8N567 271 aaKnown RBP10.56□□□□□ -0.72
CHFR-220ENST00000541817 CCDC26Q8TAB7 109 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 SH3RF2Q8TEC5 729 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 LRRC15Q8TF66 581 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 MRPS31Q92665 395 aaKnown RBP10.56□□□□□ -0.72
CHFR-220ENST00000541817 NXPE2Q96DL1 559 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 CDC6Q99741 560 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 MIR1-1HGQ9H1L0 117 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 NCOA5Q9HCD5 579 aaKnown RBP10.56□□□□□ -0.72
CHFR-220ENST00000541817 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
CHFR-220ENST00000541817 IL17BQ9UHF5 180 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
CHFR-220ENST00000541817 TMEM131Q92545 1883 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 SPTA1P02549 2419 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 KCNK3O14649 394 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 TRIM66O15016 1216 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 DTNBO60941 627 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 NDUFS2O75306 463 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 TADA3O75528 432 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 JUPP14923 745 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 MATKP42679 507 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 KIR2DL1P43626 348 aaPredicted RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 TUFMP49411 452 aaKnown RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 FAM160A1Q05DH4 1040 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 SCRN1Q12765 414 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 KCNH2Q12809 1159 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 USP4Q13107 963 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 NTRK3Q16288 839 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 HLA-BQ31612 363 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 ARL14EPQ8N8R7 260 aaPredicted RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 ANP32BQ92688 251 aaKnown RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 ZBTB45Q96K62 511 aaPredicted RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 HSD17B14Q9BPX1 270 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 FAM124BQ9H5Z6 455 aaPredicted RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 ABI2Q9NYB9 513 aaPredicted RBP10.55□□□□□ -0.72
CHFR-220ENST00000541817 GMIPQ9P107 970 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 CNTN3Q9P232 1028 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 KCNJ14Q9UNX9 436 aa10.55□□□□□ -0.72
CHFR-220ENST00000541817 CCDC196A0A1B0GTZ2 297 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 CBX4O00257 560 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 KAT7O95251 611 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 LYPLA2O95372 231 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 APODP05090 189 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 CKMP06732 381 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 GNSP15586 552 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 DDX6P26196 483 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHFR-220ENST00000541817 NFKB2Q00653 900 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 MYBPC2Q14324 1141 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 ZNF268Q14587 947 aaPredicted RBP10.54□□□□□ -0.72
CHFR-220ENST00000541817 SLC10A6Q3KNW5 377 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 C6orf118Q5T5N4 469 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 LRRTM3Q86VH5 581 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 BAP1Q92560 729 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 ZNF419Q96HQ0 510 aaPredicted RBP10.54□□□□□ -0.72
CHFR-220ENST00000541817 ZSCAN31Q96LW9 406 aaPredicted RBP10.54□□□□□ -0.72
CHFR-220ENST00000541817 NACC1Q96RE7 527 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 PNKPQ96T60 521 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
CHFR-220ENST00000541817 TARS2Q9BW92 718 aaKnown RBP10.54□□□□□ -0.72
CHFR-220ENST00000541817 RNF26Q9BY78 433 aaPredicted RBP10.54□□□□□ -0.72
CHFR-220ENST00000541817 LMBRD1Q9NUN5 540 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 TNFSF13BQ9Y275 285 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.54□□□□□ -0.72
CHFR-220ENST00000541817 SNX14Q9Y5W7 946 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 DOPEY2Q9Y3R5 2298 aa10.54□□□□□ -0.72
CHFR-220ENST00000541817 ANAPC1Q9H1A4 1944 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 TEP1Q99973 2627 aaKnown RBP10.53□□□□□ -0.72
CHFR-220ENST00000541817 A0A1B0GTW7 788 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 C2orf78A6NCI8 922 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 MYMKA6NI61 221 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 MEI4A8MW99 385 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 FLRT2O43155 660 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 TNFSF14O43557 240 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 PRPF40AO75400 957 aaKnown RBP10.53□□□□□ -0.72
CHFR-220ENST00000541817 NFATC1O95644 943 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 MBD3O95983 291 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 CYP17A1P05093 508 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 USP17L7P0C7H9 530 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 HAPLN1P10915 354 aaPredicted RBP10.53□□□□□ -0.72
CHFR-220ENST00000541817 NDUFV2P19404 249 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 ADSSP30520 456 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms