RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CPNE5Q9HCH3 593 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 ARHGEF3Q9NR81 526 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 SACM1LQ9NTJ5 587 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 SPATA31A6Q5VVP1 1343 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 CSF1RP07333 972 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 JUPP14923 745 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 BRAFP15056 766 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 ITPKBP27987 946 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 LIPAP38571 399 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 ALDH9A1P49189 494 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 FAM193AP78312 1265 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 KRT17Q04695 432 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 GALEQ14376 348 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 ZNF618Q5T7W0 954 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 TEDDM1Q5T9Z0 273 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 ZNF551Q7Z340 670 aaPredicted RBP7.45□□□□□ -1.22
YBX3-210ENST00000540975 MICU3Q86XE3 530 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 NTN5Q8WTR8 489 aaPredicted RBP7.45□□□□□ -1.22
YBX3-210ENST00000540975 NELL1Q92832 810 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 NMD3Q96D46 503 aaKnown RBP7.45□□□□□ -1.22
YBX3-210ENST00000540975 CXorf36Q9H7Y0 433 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 XPNPEP3Q9NQH7 507 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 ZSCAN32Q9NX65 697 aa7.45□□□□□ -1.22
YBX3-210ENST00000540975 TRIM43BA6NCK2 446 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 LRRC3CA6NJW4 275 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 GCOM1H8Y6P7 765 aaPredicted RBP7.44□□□□□ -1.22
YBX3-210ENST00000540975 NXPH3O95157 252 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 FAM163BP0C2L3 166 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 ZKSCAN1P17029 563 aaPredicted RBP7.44□□□□□ -1.22
YBX3-210ENST00000540975 RHCEP18577 417 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 KCNA3P22001 575 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 SOX10P56693 466 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 RHDQ02161 417 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 POLD3Q15054 466 aaPredicted RBP7.44□□□□□ -1.22
YBX3-210ENST00000540975 SLC44A4Q53GD3 710 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 TREML2Q5T2D2 321 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 DCAF12L1Q5VU92 463 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 DPY19L2P1Q6NXN4 242 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 ZNF575Q86XF7 245 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 RASAL3Q86YV0 1011 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 PPP2R3CQ969Q6 453 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 TRIM43Q96BQ3 446 aaPredicted RBP7.44□□□□□ -1.22
YBX3-210ENST00000540975 LRRC27Q9C0I9 530 aa7.44□□□□□ -1.22
YBX3-210ENST00000540975 ARPP21Q9UBL0 812 aaPredicted RBP7.44□□□□□ -1.22
YBX3-210ENST00000540975 PROP1O75360 226 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 ONECUT2O95948 504 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
YBX3-210ENST00000540975 PCSK6P29122 969 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 CCT8P50990 548 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 FAM153CQ494X1 144 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 C3orf38Q5JPI3 329 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 PPP4R4Q6NUP7 873 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 ZDHHC24Q6UX98 284 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 SLC15A3Q8IY34 581 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 OR56A3Q8NH54 315 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 ZNF384Q8TF68 577 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 GLG1Q92896 1179 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 TIFAQ96CG3 184 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 PTGFRNQ9P2B2 879 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 CHPF2Q9P2E5 772 aa7.43□□□□□ -1.22
YBX3-210ENST00000540975 AFF4Q9UHB7 1163 aaKnown RBP7.43□□□□□ -1.22
YBX3-210ENST00000540975 A1L4Q6 167 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 PYCARD-AS1I3L0S3 204 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 MGEA5O60502 916 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 MAP4K4O95819 1239 aaPredicted RBP7.42□□□□□ -1.22
YBX3-210ENST00000540975 NDUFB7P17568 137 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 PEX2P28328 305 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 ATXN1P54253 815 aaKnown RBP7.42□□□□□ -1.22
YBX3-210ENST00000540975 SEMA5AQ13591 1074 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 DGKHQ86XP1 1220 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 ZNF287Q9HBT7 754 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 GLOD4Q9HC38 313 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 ADAM21Q9UKJ8 722 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 OGDHLQ9ULD0 1010 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 SH2B3Q9UQQ2 575 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 TBC1D30Q9Y2I9 924 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 PAXBP1Q9Y5B6 917 aa7.42□□□□□ -1.22
YBX3-210ENST00000540975 FER1L4A9Z1Z3 1794 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 FESP07332 822 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 EBLN1P0CF75 366 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 GPD1P21695 349 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 ADORA2AP29274 412 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 PDE6CP51160 858 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 CLCN2P51788 898 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 NHLH1Q02575 133 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 PTCHD3Q3KNS1 767 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 SESTD1Q86VW0 696 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 ABRAQ8N0Z2 381 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 BPIFB1Q8TDL5 484 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 SPSB4Q96A44 273 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 SARAFQ96BY9 339 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 ZNF764Q96H86 408 aaPredicted RBP7.41□□□□□ -1.22
YBX3-210ENST00000540975 DLL3Q9NYJ7 618 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 COL20A1Q9P218 1284 aa7.41□□□□□ -1.22
YBX3-210ENST00000540975 MBD3L4A6NDZ8 208 aaPredicted RBP7.4□□□□□ -1.22
YBX3-210ENST00000540975 MBD3L3A6NE82 208 aaPredicted RBP7.4□□□□□ -1.22
YBX3-210ENST00000540975 CYP2C18P33260 490 aa7.4□□□□□ -1.22
YBX3-210ENST00000540975 PRKAG1P54619 331 aa7.4□□□□□ -1.22
YBX3-210ENST00000540975 PDE1AP54750 535 aa7.4□□□□□ -1.22
YBX3-210ENST00000540975 DEPDC1Q5TB30 811 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms