RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 QRICH1Q2TAL8 776 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CCDC14Q49A88 953 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 IZUMO3Q5VZ72 239 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 PHLDB3Q6NSJ2 640 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 SWSAP1Q6NVH7 229 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 PRUNE1Q86TP1 453 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 ETNPPLQ8TBG4 499 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 ZNF398Q8TD17 642 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 ATG4AQ8WYN0 398 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 MAML1Q92585 1016 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CDHR1Q96JP9 859 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 MIPEPQ99797 713 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 TMEM106CQ9BVX2 250 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CADM1Q9BY67 442 aaKnown RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 FHDC1Q9C0D6 1143 aaPredicted RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 IKZF4Q9H2S9 585 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 PCDHB4Q9Y5E5 795 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 WASF2Q9Y6W5 498 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 THSD7BQ9C0I4 1608 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 MYOCOSA0A1B0GUC4 107 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 A0A1W2PQ67 120 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 POC1B-GALNT4F8VUJ3 575 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CRCPO75575 148 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 SPATA31C1P0DKV0 1188 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 ALOX15P16050 662 aaPredicted RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 VARSP26640 1264 aaKnown RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 AP1B1Q10567 949 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 BFSP1Q12934 665 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 KRT81Q14533 505 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 COG2Q14746 738 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 PSMD6Q15008 389 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 KCTD21Q4G0X4 260 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 ACSBG2Q5FVE4 666 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 TMEM63BQ5T3F8 832 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 MOXD1Q6UVY6 613 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 OTOAQ7RTW8 1153 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CLNKQ7Z7G1 428 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 SDCCAG8Q86SQ7 713 aaPredicted RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 MTDHQ86UE4 582 aaKnown RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 FAM160B2Q86V87 743 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 VPS52Q8N1B4 723 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 DENND1AQ8TEH3 1009 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 SREK1Q8WXA9 508 aaKnown RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 PSPC1Q8WXF1 523 aaKnown RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 PTPRN2Q92932 1015 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 BTBD10Q9BSF8 475 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 GLIS2Q9BZE0 524 aaPredicted RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 DCLK3Q9C098 648 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 RPAP3Q9H6T3 665 aaPredicted RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 BCAS3Q9H6U6 928 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 LRRC4Q9HBW1 653 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 NPHS2Q9NP85 383 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 UVRAGQ9P2Y5 699 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 HACL1Q9UJ83 578 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 GTF3C4Q9UKN8 822 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 UBE4BO95155 1302 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 GIPC1O14908 333 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 LSM1O15116 133 aaKnown RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 GYG2O15488 501 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 NDUFB10O96000 172 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CYP1A2P05177 515 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 GZMAP12544 262 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 RRM1P23921 792 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CCND2P30279 289 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 MAGEA4P43358 317 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CCR3P51677 355 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 SLC18A1P54219 525 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 BAATQ14032 418 aaPredicted RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 KIAA0100Q14667 2235 aaKnown RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 ACAP1Q15027 740 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CFAP157Q5JU67 520 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 RHPN2Q8IUC4 686 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 ARHGEF19Q8IW93 802 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 C4orf33Q8N1A6 199 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 CCNYQ8ND76 341 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 OR6B3Q8NGW1 331 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 GATA6Q92908 595 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 SNX25Q9H3E2 840 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 FBXO28Q9NVF7 368 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 STX18Q9P2W9 335 aaKnown RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 ZNF70Q9UC06 446 aaPredicted RBP5.47□□□□□ -1.53
PROM1-220ENST00000540805 ZNF212Q9UDV6 495 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 ANGPTL2Q9UKU9 493 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 GVINP1Q7Z2Y8 2422 aa5.47□□□□□ -1.53
PROM1-220ENST00000540805 ZNF536O15090 1300 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 ASTN2O75129 1339 aaPredicted RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 CCL15-CCL14A0A0B4J2E2 113 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 DENND3A2RUS2 1198 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 PDLIM1O00151 329 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 TBX3O15119 743 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 TBC1D12O60347 775 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 SGPL1O95470 568 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 SETSIPP0DME0 302 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 TXNP10599 105 aaKnown RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 RARBP10826 455 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 HOXD11P31277 338 aaPredicted RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 APLP1P51693 650 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 CLCN2P51788 898 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 ATN1P54259 1190 aaPredicted RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 DYNLT1P63172 113 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms