RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 TLK2Q86UE8 772 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 CCDC25Q86WR0 208 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 EMC1Q8N766 993 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 NINJ2Q9NZG7 142 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 TSPAN16Q9UKR8 245 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 TRIP12Q14669 1992 aaPredicted RBP14.48□□□□□ -0.09
RTN3-210ENST00000540798 IGF2BP3O00425 579 aaKnown RBP eCLIP14.48□□□□□ -0.09
RTN3-210ENST00000540798 PPEF2O14830 753 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 ENDOD1O94919 500 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 TRUB2O95900 331 aaKnown RBP14.48□□□□□ -0.09
RTN3-210ENST00000540798 CCT5P48643 541 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 ODF2Q5BJF6 829 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 TRNP1Q6NT89 227 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 NLRP14Q86W24 1093 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 FAM49AQ9H0Q0 323 aaPredicted RBP14.48□□□□□ -0.09
RTN3-210ENST00000540798 SYNCQ9H7C4 482 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 TUBGCP4Q9UGJ1 667 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 GJD2Q9UKL4 321 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 Q9Y3F1 56 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 C2CD4BA6NLJ0 364 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 RASGRF2O14827 1237 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 RGS16O15492 202 aaPredicted RBP14.48□□□□□ -0.09
RTN3-210ENST00000540798 FAM107AO95990 144 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 CYP2C9P11712 490 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 TMEM62Q0P6H9 643 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 P3H1Q32P28 736 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 PRUNE1Q86TP1 453 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 UBA3Q8TBC4 463 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 MYCBPAPQ8TBZ2 947 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 SERPINB12Q96P63 405 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 TSPAN18Q96SJ8 248 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 OSMRQ99650 979 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 MRPL45Q9BRJ2 306 aaKnown RBP14.48□□□□□ -0.09
RTN3-210ENST00000540798 MIS12Q9H081 205 aa14.48□□□□□ -0.09
RTN3-210ENST00000540798 MIPP30301 263 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 PSEN2P49810 448 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 IFI35P80217 286 aaPredicted RBP14.47□□□□□ -0.09
RTN3-210ENST00000540798 CEP128Q6ZU80 1094 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 LIMS2Q7Z4I7 341 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 SLC4A5Q9BY07 1137 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 STMN4Q9H169 189 aaPredicted RBP14.47□□□□□ -0.09
RTN3-210ENST00000540798 PCDH9Q9HC56 1237 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 RRP15Q9Y3B9 282 aaKnown RBP14.47□□□□□ -0.09
RTN3-210ENST00000540798 ATXN2Q99700 1313 aaKnown RBP14.47□□□□□ -0.09
RTN3-210ENST00000540798 MYO1CO00159 1063 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 DPYSL4O14531 572 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 SETSIPP0DME0 302 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 ARSEP51690 589 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 C9orf57Q5W0N0 161 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 FAM183BPQ6ZVS7 135 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 GSTA5Q7RTV2 222 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 UNC93AQ86WB7 457 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 RASAL3Q86YV0 1011 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 BEST2Q8NFU1 509 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 ZNF473Q8WTR7 871 aaKnown RBP14.47□□□□□ -0.09
RTN3-210ENST00000540798 CCT8L2Q96SF2 557 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 NCAPGQ9BPX3 1015 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 ZWILCHQ9H900 591 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 ASNSD1Q9NWL6 643 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 ZNF148Q9UQR1 794 aa14.47□□□□□ -0.09
RTN3-210ENST00000540798 NDUFAB1O14561 156 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 ABHD2P08910 425 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 VPS41P49754 854 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 YARSP54577 528 aaKnown RBP14.46□□□□□ -0.09
RTN3-210ENST00000540798 GOLGA7BQ2TAP0 167 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 UBXN11Q5T124 520 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 FAM102AQ5T9C2 384 aaPredicted RBP14.46□□□□□ -0.09
RTN3-210ENST00000540798 TTC30AQ86WT1 665 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 TTC13Q8NBP0 860 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 TMEM40Q8WWA1 233 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 PWWP2AQ96N64 755 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 PEBP4Q96S96 227 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 CNPY3Q9BT09 278 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 NXF3Q9H4D5 531 aaKnown RBP14.46□□□□□ -0.09
RTN3-210ENST00000540798 RRAGCQ9HB90 399 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 E5RJQ4 531 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 PIRO00625 290 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 GPD1P21695 349 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 CPT1AP50416 773 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 SEC24CP53992 1094 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 SNX17Q15036 470 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 SMTNL2Q2TAL5 461 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 KCNT1Q5JUK3 1230 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 ERMARDQ5T6L9 678 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 PPP1R26Q5T8A7 1209 aaPredicted RBP14.46□□□□□ -0.09
RTN3-210ENST00000540798 RNASEH2BQ5TBB1 312 aaKnown RBP14.46□□□□□ -0.09
RTN3-210ENST00000540798 ARHGAP17Q68EM7 881 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 C17orf99Q6UX52 265 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 TMEM110Q86TL2 294 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 C12orf29Q8N999 325 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 UHMK1Q8TAS1 419 aaKnown RBP14.46□□□□□ -0.09
RTN3-210ENST00000540798 C18orf25Q96B23 403 aaPredicted RBP14.46□□□□□ -0.09
RTN3-210ENST00000540798 LENG1Q96BZ8 264 aaPredicted RBP14.46□□□□□ -0.09
RTN3-210ENST00000540798 USP18Q9UMW8 372 aa14.46□□□□□ -0.09
RTN3-210ENST00000540798 GMNCA6NCL1 334 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 C5orf60A6NFR6 353 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 NDC80O14777 642 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 RECQL4O94761 1208 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 ACSL3O95573 720 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 CD48P09326 243 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms