RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 ATXN2Q99700 1313 aaKnown RBP10.04□□□□□ -0.8
LCOR-209ENST00000540664 SCN1AP35498 2009 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 C2CD4BA6NLJ0 364 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 EBAG9O00559 213 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 TRUB2O95900 331 aaKnown RBP10.04□□□□□ -0.8
LCOR-209ENST00000540664 MIPP30301 263 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 HOXC8P31273 242 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 ZNF157P51786 506 aaPredicted RBP10.04□□□□□ -0.8
LCOR-209ENST00000540664 SEC24CP53992 1094 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 MFSD10Q14728 455 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 P3H1Q32P28 736 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 XKR4Q5GH76 650 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 PRAMEF19Q5SWL8 479 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 ERMARDQ5T6L9 678 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 TRNP1Q6NT89 227 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 CEP128Q6ZU80 1094 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
LCOR-209ENST00000540664 PRUNE1Q86TP1 453 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 TLK2Q86UE8 772 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 UBA3Q8TBC4 463 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 ZNF473Q8WTR7 871 aaKnown RBP10.04□□□□□ -0.8
LCOR-209ENST00000540664 TSPAN18Q96SJ8 248 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 OSMRQ99650 979 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 MRPL45Q9BRJ2 306 aaKnown RBP10.04□□□□□ -0.8
LCOR-209ENST00000540664 MIS12Q9H081 205 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 FAM49AQ9H0Q0 323 aaPredicted RBP10.04□□□□□ -0.8
LCOR-209ENST00000540664 SYNCQ9H7C4 482 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 PCDH9Q9HC56 1237 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 GGA2Q9UJY4 613 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 GJD2Q9UKL4 321 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 ZNF148Q9UQR1 794 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 Q9Y3F1 56 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 DOCK3Q8IZD9 2030 aa10.04□□□□□ -0.8
LCOR-209ENST00000540664 TLDC2A0PJX2 215 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 GMNCA6NCL1 334 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 C5orf60A6NFR6 353 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 MANSC4A6NHS7 340 aaPredicted RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 DPYSL4O14531 572 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 PPEF2O14830 753 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 ABHD2P08910 425 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 SETSIPP0DME0 302 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 CYP2C9P11712 490 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 VPS41P49754 854 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 PSEN2P49810 448 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 ARSEP51690 589 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 TMEM62Q0P6H9 643 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 KYNUQ16719 465 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 KCNT1Q5JUK3 1230 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 ZFYVE27Q5T4F4 411 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 FAM183BPQ6ZVS7 135 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 GSTA5Q7RTV2 222 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 LIMS2Q7Z4I7 341 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 UNC93AQ86WB7 457 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 TTC13Q8NBP0 860 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 UHMK1Q8TAS1 419 aaKnown RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 PWWP2AQ96N64 755 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 CNPY3Q9BT09 278 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 SLC4A5Q9BY07 1137 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 RABEP2Q9H5N1 569 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 ZWILCHQ9H900 591 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 ASNSD1Q9NWL6 643 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 EURLQ9NYK6 297 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 TUBGCP4Q9UGJ1 667 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 TPX2Q9ULW0 747 aaKnown RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 E5RJQ4 531 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 PIRO00625 290 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 NDC80O14777 642 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 ECM2O94769 699 aaPredicted RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 ACSL3O95573 720 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 CD48P09326 243 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 GPD1P21695 349 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 CDR1P51861 262 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 YARSP54577 528 aaKnown RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 MORF4L2Q15014 288 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 TAF1CQ15572 869 aaPredicted RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 SMTNL2Q2TAL5 461 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 PPP1R26Q5T8A7 1209 aaPredicted RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 FAM102AQ5T9C2 384 aaPredicted RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 RNASEH2BQ5TBB1 312 aaKnown RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 C9orf57Q5W0N0 161 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 ARHGAP17Q68EM7 881 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 B4GALNT4Q76KP1 1039 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 TMEM110Q86TL2 294 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 TTC30AQ86WT1 665 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 SPATS2Q86XZ4 545 aaKnown RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 C12orf29Q8N999 325 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 BEST2Q8NFU1 509 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 STK32AQ8WU08 396 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 SLC35F5Q8WV83 523 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 ATXN2LQ8WWM7 1075 aaKnown RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.82e-6■■■□□ 17.8
LCOR-209ENST00000540664 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
LCOR-209ENST00000540664 PEBP4Q96S96 227 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 CCDC134Q9H6E4 229 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 LGALS13Q9UHV8 139 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 USP18Q9UMW8 372 aa10.03□□□□□ -0.8
LCOR-209ENST00000540664 E7EVH7 732 aa10.02□□□□□ -0.81
LCOR-209ENST00000540664 MYO1CO00159 1063 aa10.02□□□□□ -0.81
LCOR-209ENST00000540664 CST8O60676 142 aa10.02□□□□□ -0.81
LCOR-209ENST00000540664 RNF8O76064 485 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms