RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 Q7L0L9 218 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 FAM35AQ86V20 835 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 TCEAL8Q8IYN2 117 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 DEFB123Q8N688 67 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 ANKRD52Q8NB46 1076 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 KREMEN2Q8NCW0 462 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 ZNF518BQ9C0D4 1074 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 PLEKHA4Q9H4M7 779 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 IGFLR1Q9H665 355 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 FBXW11Q9UKB1 542 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDB1-216ENST00000539739 CEP83Q9Y592 693 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 AP1G2O75843 785 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 SERPING1P05155 500 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 CYP2F1P24903 491 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 HNRNPH3P31942 346 aaKnown RBP16.34■□□□□ 0.21
DDB1-216ENST00000539739 GRIK1P39086 918 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 PRKCIP41743 596 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 MAGEA11P43364 429 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 GOLGA8FQ08AF8 430 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 GOLGA8DPQ0D2H9 430 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 ARID5BQ14865 1188 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 MEA1Q16626 185 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 TDRD12Q587J7 1177 aaKnown RBP16.34■□□□□ 0.21
DDB1-216ENST00000539739 PAQR9Q6ZVX9 377 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 RTL10Q7L3V2 364 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 NOP9Q86U38 636 aaKnown RBP16.34■□□□□ 0.21
DDB1-216ENST00000539739 TC2NQ8N9U0 490 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 SLC22A17Q8WUG5 538 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 HDAC7Q8WUI4 952 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 SEPT5Q99719 369 aaPredicted RBP16.34■□□□□ 0.21
DDB1-216ENST00000539739 ZSWIM1Q9BR11 485 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 KRT82Q9NSB4 513 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 PCDHGC3Q9UN70 934 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 SLC27A5Q9Y2P5 690 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 HCFC2Q9Y5Z7 792 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 CDH23Q9H251 3354 aa16.33■□□□□ 0.21
DDB1-216ENST00000539739 SPDYE4A6NLX3 237 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 M0QYV0 167 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 TRIM66O15016 1216 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 NCK2O43639 380 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 MICAL2O94851 1124 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 VNN2O95498 520 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 SPATA31D3P0C874 917 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 SRGAP2BP0DMP2 458 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 HAPLN1P10915 354 aaPredicted RBP16.33■□□□□ 0.2
DDB1-216ENST00000539739 ANXA13P27216 316 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 ALDH1A3P47895 512 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 BCAT1P54687 386 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 GSDMDP57764 484 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 RPL10AP62906 217 aaKnown RBP16.33■□□□□ 0.2
DDB1-216ENST00000539739 FAM193AP78312 1265 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 CDR2Q01850 454 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 BST2Q10589 180 aaKnown RBP16.33■□□□□ 0.2
DDB1-216ENST00000539739 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.2
DDB1-216ENST00000539739 SPATA31D4Q6ZUB0 917 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 VPS36Q86VN1 386 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 SCN4BQ8IWT1 228 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 DUSP16Q9BY84 665 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 HAUS4Q9H6D7 363 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 DMAP1Q9NPF5 467 aaPredicted RBP16.33■□□□□ 0.2
DDB1-216ENST00000539739 MAN1C1Q9NR34 630 aa16.33■□□□□ 0.2
DDB1-216ENST00000539739 NOCTQ9UK39 431 aaKnown RBP16.33■□□□□ 0.2
DDB1-216ENST00000539739 SEC24AO95486 1093 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 SKILP12757 684 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 EPCAMP16422 314 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 NPR3P17342 541 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 HYAL1Q12794 435 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 LLGL2Q6P1M3 1020 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 MICALL1Q8N3F8 863 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 DDX1Q92499 740 aaKnown RBP16.32■□□□□ 0.2
DDB1-216ENST00000539739 CASP10Q92851 521 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 PANX2Q96RD6 677 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 CDX2Q99626 313 aaPredicted RBP16.32■□□□□ 0.2
DDB1-216ENST00000539739 AGPAT1Q99943 283 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 RHOBTB2Q9BYZ6 727 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 TRANK1O15050 2925 aa16.32■□□□□ 0.2
DDB1-216ENST00000539739 PRRC2BQ5JSZ5 2229 aaKnown RBP16.32■□□□□ 0.2
DDB1-216ENST00000539739 C8AP07357 584 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 MMEP08473 750 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 SETSIPP0DME0 302 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 TNFAIP3P21580 790 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 SSTR3P32745 418 aaPredicted RBP16.31■□□□□ 0.2
DDB1-216ENST00000539739 MAP3K7CLP57077 242 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 PLD1Q13393 1074 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 TRIM72Q6ZMU5 477 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 CLEC20AQ6ZU45 233 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 TTC30AQ86WT1 665 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 TTC9BQ8N6N2 239 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 EFHBQ8N7U6 833 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 SLC7A14Q8TBB6 771 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 UBA3Q8TBC4 463 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 SLC20A1Q8WUM9 679 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 MYLIPQ8WY64 445 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 C8orf48Q96LL4 319 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 LHX5Q9H2C1 402 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 CRISPLD1Q9H336 500 aa16.31■□□□□ 0.2
DDB1-216ENST00000539739 SEPT11Q9NVA2 429 aaKnown RBP16.31■□□□□ 0.2
DDB1-216ENST00000539739 CCDC66A2RUB6 948 aa16.3■□□□□ 0.2
DDB1-216ENST00000539739 F8VP50 259 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms