RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SERTAD1Q9UHV2 236 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 EXOC7Q9UPT5 735 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 ASB3Q9Y575 518 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 CACNA1EQ15878 2313 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 NUP205Q92621 2012 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 A0A0B4J269 797 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 ANO9A1A5B4 782 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 PPP1R37O75864 691 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 GCNT3O95395 438 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 CDC25CP30307 473 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 GJA4P35212 333 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 AFMP43652 599 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 NOVA1P51513 510 aaKnown RBP16.05■□□□□ 0.16
USB1-203ENST00000539737 SEC13P55735 322 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 BFSP1Q12934 665 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 SLFN12LQ6IEE8 588 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 KIAA1211LQ6NV74 962 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 UNC13DQ70J99 1090 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 IPO9Q96P70 1041 aaKnown RBP16.05■□□□□ 0.16
USB1-203ENST00000539737 OXCT2Q9BYC2 517 aaPredicted RBP16.05■□□□□ 0.16
USB1-203ENST00000539737 GOLPH3LQ9H4A5 285 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 PCDHB13Q9Y5F0 798 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 PKD1L2Q7Z442 2459 aa16.05■□□□□ 0.16
USB1-203ENST00000539737 GON4LQ3T8J9 2241 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 THADAQ6YHU6 1953 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 PVALEFA0A1B0GWK0 134 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 LNP1A1A4G5 178 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 TRDMT1O14717 391 aaKnown RBP16.04■□□□□ 0.16
USB1-203ENST00000539737 CYP11A1P05108 521 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 ADRB2P07550 413 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 PAX3P23760 479 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 GBP1P32455 592 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 AVPR1AP37288 418 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 COL9A2Q14055 689 aaPredicted RBP16.04■□□□□ 0.16
USB1-203ENST00000539737 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
USB1-203ENST00000539737 C1orf228Q6PIY5 440 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 OSTM1Q86WC4 334 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 TTC30AQ86WT1 665 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 SYNPOQ8N3V7 929 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 FRMD1Q8N878 549 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 PAGE5Q96GU1 130 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 ACCSQ96QU6 501 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 STRA6Q9BX79 667 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 THG1LQ9NWX6 298 aaKnown RBP16.04■□□□□ 0.16
USB1-203ENST00000539737 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 ZMIZ1Q9ULJ6 1067 aa16.04■□□□□ 0.16
USB1-203ENST00000539737 UBE4BO95155 1302 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
USB1-203ENST00000539737 HNRNPLP14866 589 aaKnown RBP eCLIP16.03■□□□□ 0.16
USB1-203ENST00000539737 CYP2F1P24903 491 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 TUFMP49411 452 aaKnown RBP16.03■□□□□ 0.16
USB1-203ENST00000539737 SHC2P98077 582 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 ZNF252P-AS1Q0IIN9 211 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 MESP2Q0VG99 397 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 CUL4BQ13620 913 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 DMC1Q14565 340 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 POSTNQ15063 836 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 FAM26FQ5R3K3 315 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 KRBA2Q6ZNG9 492 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 P2RY13Q9BPV8 354 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 LINC00597Q9H2U6 94 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 TDP1Q9NUW8 608 aa16.03■□□□□ 0.16
USB1-203ENST00000539737 ASCC3Q8N3C0 2202 aaKnown RBP16.03■□□□□ 0.16
USB1-203ENST00000539737 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.02■□□□□ 0.16
USB1-203ENST00000539737 C2orf78A6NCI8 922 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 EIF3DO15371 548 aaKnown RBP eCLIP16.02■□□□□ 0.16
USB1-203ENST00000539737 ZNF202O95125 648 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 FGF19O95750 216 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 CAVIN2O95810 425 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 PROS1P07225 676 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 TAF6P49848 677 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 DGKEP52429 567 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 FAM160A1Q05DH4 1040 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 KCNA1Q09470 495 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 MTF1Q14872 753 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 SH3PXD2AQ5TCZ1 1133 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 CRELD2Q6UXH1 353 aaPredicted RBP16.02■□□□□ 0.16
USB1-203ENST00000539737 UNQ6494/PRO21346Q6UXR6 183 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 METTL23Q86XA0 190 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 CCDC33Q8N5R6 958 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 DDX1Q92499 740 aaKnown RBP16.02■□□□□ 0.16
USB1-203ENST00000539737 CCDC47Q96A33 483 aaKnown RBP16.02■□□□□ 0.16
USB1-203ENST00000539737 LOXL4Q96JB6 756 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 ZC3H10Q96K80 434 aaKnown RBP16.02■□□□□ 0.16
USB1-203ENST00000539737 TMEM206Q9H813 350 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 ECT2Q9H8V3 914 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 EXOC1Q9NV70 894 aa16.02■□□□□ 0.16
USB1-203ENST00000539737 ATXN2Q99700 1313 aaKnown RBP16.01■□□□□ 0.15
USB1-203ENST00000539737 CASP1P29466 404 aa16.01■□□□□ 0.15
USB1-203ENST00000539737 WEE1P30291 646 aa16.01■□□□□ 0.15
USB1-203ENST00000539737 POLR2BP30876 1174 aaKnown RBP16.01■□□□□ 0.15
USB1-203ENST00000539737 CASP5P51878 434 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms