RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 GNAT1P11488 350 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 SP100P23497 879 aaPredicted RBP21.27■■□□□ 1
TMEM260-203ENST00000539559 ADGRD1Q6QNK2 874 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 ALYREFQ86V81 257 aaKnown RBP21.27■■□□□ 1
TMEM260-203ENST00000539559 ZC3H18Q86VM9 953 aaKnown RBP21.27■■□□□ 1
TMEM260-203ENST00000539559 ATP11CQ8NB49 1132 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 SAR1AQ9NR31 198 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 TAS2R1Q9NYW7 299 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 DRG1Q9Y295 367 aaKnown RBP21.27■■□□□ 1
TMEM260-203ENST00000539559 SIGLEC16A6NMB1 481 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 LPXNO60711 386 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 STBD1O95210 358 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 BASP1P80723 227 aaKnown RBP21.27■■□□□ 1
TMEM260-203ENST00000539559 KRT76Q01546 638 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 DRICH1Q6PGQ1 229 aaPredicted RBP21.27■■□□□ 1
TMEM260-203ENST00000539559 TRIM72Q6ZMU5 477 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 CCDC60Q8IWA6 550 aaPredicted RBP21.27■■□□□ 1
TMEM260-203ENST00000539559 TEKT4Q8WW24 435 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 NSL1Q96IY1 281 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 TSC22D3Q99576 134 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 ZNF395Q9H8N7 513 aaPredicted RBP21.27■■□□□ 1
TMEM260-203ENST00000539559 PXMP2Q9NR77 195 aa21.27■■□□□ 1
TMEM260-203ENST00000539559 DOCK5Q9H7D0 1870 aa21.27■□□□□ 0.99
TMEM260-203ENST00000539559 NFASCO94856 1347 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 ITGAVP06756 1048 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 IL1R2P27930 398 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 VHLP40337 213 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 ARL4CP56559 192 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 INHBEP58166 350 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 MRPS35P82673 323 aaKnown RBP21.26■□□□□ 0.99
TMEM260-203ENST00000539559 SCARA5Q6ZMJ2 495 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 MCF2L2Q86YR7 1114 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 FAM136AQ96C01 138 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 VCPIP1Q96JH7 1222 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 ANKRD27Q96NW4 1050 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 MECRQ9BV79 373 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 DEFB129Q9H1M3 183 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 STOML1Q9UBI4 398 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.26■□□□□ 0.99
TMEM260-203ENST00000539559 AVILO75366 819 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 AMPD1P23109 780 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 YY1P25490 414 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 FAAP100Q0VG06 881 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 TAF5Q15542 800 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 FAM71DQ8N9W8 422 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 SLC35B2Q8TB61 432 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 NKD2Q969F2 451 aaPredicted RBP21.26■□□□□ 0.99
TMEM260-203ENST00000539559 ACSS3Q9H6R3 686 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 ARHGAP28Q9P2N2 729 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 RIPK3Q9Y572 518 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 SNCAIPQ9Y6H5 919 aa21.26■□□□□ 0.99
TMEM260-203ENST00000539559 LRRIQ4A6NIV6 560 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 MT-ND3P03897 115 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 MYL2P10916 166 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 PYGBP11216 843 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 SFNP31947 248 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 NCOA4Q13772 614 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 PPIL6Q8IXY8 311 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 NAT8LQ8N9F0 302 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 NMUR2Q9GZQ4 415 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 PCSK1NQ9UHG2 260 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 XPO7Q9UIA9 1087 aaKnown RBP21.25■□□□□ 0.99
TMEM260-203ENST00000539559 HIRAP54198 1017 aaPredicted RBP21.25■□□□□ 0.99
TMEM260-203ENST00000539559 PRKCEQ02156 737 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 THOC5Q13769 683 aaKnown RBP21.25■□□□□ 0.99
TMEM260-203ENST00000539559 GPAT2Q6NUI2 795 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 KBTBD2Q8IY47 623 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 EMC1Q8N766 993 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 RSAD2Q8WXG1 361 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 HACL1Q9UJ83 578 aa21.25■□□□□ 0.99
TMEM260-203ENST00000539559 TTLL13PA6NNM8 815 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 AP1G2O75843 785 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 PSMG1O95456 288 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 WEE2P0C1S8 567 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 ESRRAP11474 423 aaPredicted RBP21.24■□□□□ 0.99
TMEM260-203ENST00000539559 PHBP35232 272 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 RFC1P35251 1148 aaPredicted RBP21.24■□□□□ 0.99
TMEM260-203ENST00000539559 CLDN10P78369 228 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 PTK7Q13308 1070 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 BAATQ14032 418 aaPredicted RBP21.24■□□□□ 0.99
TMEM260-203ENST00000539559 LRRC74BQ6ZQY2 392 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 CDHR3Q6ZTQ4 885 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 KIAA0319LQ8IZA0 1049 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 TMEM130Q8N3G9 435 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 WDTC1Q8N5D0 677 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 ARFGAP1Q8N6T3 406 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 JOSD2Q8TAC2 188 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 SKA1Q96BD8 255 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 CLPTM1LQ96KA5 538 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 MSTO1Q9BUK6 570 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 CCDC195A0A1B0GUA6 201 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 C3orf70A6NLC5 250 aaPredicted RBP21.24■□□□□ 0.99
TMEM260-203ENST00000539559 TNFSF9P41273 254 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 ELK3P41970 407 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 KBTBD12Q3ZCT8 623 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 TFAP2BQ92481 460 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 DDX50Q9BQ39 737 aaKnown RBP21.24■□□□□ 0.99
TMEM260-203ENST00000539559 DHRS4Q9BTZ2 278 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 CYP26B1Q9NR63 512 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms