RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TGFB2P61812 414 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 CDK16Q00536 496 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 SLC25A11Q02978 314 aaKnown RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 SLC18A2Q05940 514 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 GRM1Q13255 1194 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 PRKD1Q15139 912 aaPredicted RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 GPAT2Q6NUI2 795 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 RFWD3Q6PCD5 774 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 LRRC6Q86X45 466 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 NSUN6Q8TEA1 469 aaKnown RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 RSAD2Q8WXG1 361 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 PTPRN2Q92932 1015 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 TMEM143Q96AN5 459 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 SKA1Q96BD8 255 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 ZBED3Q96IU2 234 aaPredicted RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 ZNF333Q96JL9 665 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 DHX33Q9H6R0 707 aaKnown RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 SAE1Q9UBE0 346 aaPredicted RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 FBXO40Q9UH90 709 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 AGTPBP1Q9UPW5 1226 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 RIPK3Q9Y572 518 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 FER1L6Q2WGJ9 1857 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 A0A0G2JND7 137 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 IQANK1A0A1B0GTG1 560 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 CFAP69A5D8W1 941 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 DPPA5A6NC42 116 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 LRRIQ4A6NIV6 560 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 SIGLEC16A6NMB1 481 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 SPATA31C2B4DYI2 1134 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 GOLGA8RI6L899 631 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 NVLO15381 856 aaKnown RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 LPXNO60711 386 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 SUPT20HL2P0C7V6 817 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 RFC1P35251 1148 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 ETV4P43268 484 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 CBLBQ13191 982 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 DGKZQ13574 1117 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 HADHQ16836 314 aaKnown RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 SGSM1Q2NKQ1 1148 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 BBS9Q3SYG4 887 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 SUPT20HL1Q3ZLR7 823 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 FAM91A1Q658Y4 838 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 SCARA3Q6AZY7 606 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 SH2D5Q6ZV89 423 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 ARFGAP1Q8N6T3 406 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 C12orf65Q9H3J6 166 aaKnown RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 MMADHCQ9H3L0 296 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 CISHQ9NSE2 258 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 XPO7Q9UIA9 1087 aaKnown RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 STRIP2Q9ULQ0 834 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 TCRBV7S3A2A0A539 114 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 PLSCR1O15162 318 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 GYG2O15488 501 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 STAM2O75886 525 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 FAM155BO75949 473 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 TMEM63AO94886 807 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 ATG7O95352 703 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 DLDP09622 509 aaKnown RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 PSMA2P25787 234 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 POLR2BP30876 1174 aaKnown RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 DYNLT1P63172 113 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 OCRLQ01968 901 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 KLC1Q07866 573 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 NAIF1Q69YI7 327 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 DSTYKQ6XUX3 929 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 APBB1IPQ7Z5R6 666 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 WDR49Q8IV35 697 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 BRSK2Q8IWQ3 736 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 UNC45BQ8IWX7 931 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDH13-204ENST00000539548 ZNF483Q8TF39 744 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 FNIP1Q8TF40 1166 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 TFAP2BQ92481 460 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 APOPT1Q96IL0 206 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 KLF6Q99612 283 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 TMEM120AQ9BXJ8 343 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 NIF3L1Q9GZT8 377 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 RPAP3Q9H6T3 665 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 C10orf88Q9H8K7 445 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 POLIQ9UNA4 740 aa10.12□□□□□ -0.79
CDH13-204ENST00000539548 MAFBQ9Y5Q3 323 aaPredicted RBP10.12□□□□□ -0.79
CDH13-204ENST00000539548 KLF11O14901 512 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 LRCH4O75427 683 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 PIAS1O75925 651 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 PSMG1O95456 288 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 NPTXRO95502 500 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 EDN1P05305 212 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 KRT3P12035 628 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 IL1R2P27930 398 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 SERPINB3P29508 390 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 MYL6P60660 151 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 SATB1Q01826 763 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 SP4Q02446 784 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 ZBTB16Q05516 673 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 DPYSL3Q14195 570 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 CCDC6Q16204 474 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 MUM1Q2TAK8 710 aa10.11□□□□□ -0.79
CDH13-204ENST00000539548 CYP4A22Q5TCH4 519 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms