RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SOX8P57073 446 aa6.54□□□□□ -1.36
CCDC7-209ENST00000539197 E2F2Q14209 437 aa6.54□□□□□ -1.36
CCDC7-209ENST00000539197 PGS1Q32NB8 556 aa6.54□□□□□ -1.36
CCDC7-209ENST00000539197 Q4G0T1 1027 aa6.54□□□□□ -1.36
CCDC7-209ENST00000539197 RNF187Q5TA31 235 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-209ENST00000539197 ZNF517Q6ZMY9 492 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-209ENST00000539197 KRT73Q86Y46 540 aa6.54□□□□□ -1.36
CCDC7-209ENST00000539197 ZNF280BQ86YH2 543 aa6.54□□□□□ -1.36
CCDC7-209ENST00000539197 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
CCDC7-209ENST00000539197 BRIX1Q8TDN6 353 aaKnown RBP6.54□□□□□ -1.36
CCDC7-209ENST00000539197 SLC35A4Q96G79 324 aa6.54□□□□□ -1.36
CCDC7-209ENST00000539197 LENG8Q96PV6 779 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-209ENST00000539197 ALG1L2C9J202 215 aa6.53□□□□□ -1.36
CCDC7-209ENST00000539197 VNN1O95497 513 aa6.53□□□□□ -1.36
CCDC7-209ENST00000539197 GRPP07492 148 aa6.53□□□□□ -1.36
CCDC7-209ENST00000539197 TPTEP56180 551 aa6.53□□□□□ -1.36
CCDC7-209ENST00000539197 GPSM2P81274 684 aa6.53□□□□□ -1.36
CCDC7-209ENST00000539197 CERKLQ49MI3 558 aaPredicted RBP6.53□□□□□ -1.36
CCDC7-209ENST00000539197 KIRREL2Q6UWL6 708 aa6.53□□□□□ -1.36
CCDC7-209ENST00000539197 ABHD11Q8NFV4 315 aa6.53□□□□□ -1.36
CCDC7-209ENST00000539197 ZC3H10Q96K80 434 aaKnown RBP6.53□□□□□ -1.36
CCDC7-209ENST00000539197 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC7-209ENST00000539197 POC1B-GALNT4F8VUJ3 575 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 EXOC3O60645 756 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 BCAR3O75815 825 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 TJP3O95049 919 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 CSF1RP07333 972 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 DLDP09622 509 aaKnown RBP6.52□□□□□ -1.37
CCDC7-209ENST00000539197 FPR3P25089 353 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 ADORA2AP29274 412 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 LY6KQ17RY6 165 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 ZNF260Q3ZCT1 412 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 CCDC157Q569K6 752 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 KHDC1LQ5JSQ8 128 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 DEPDC1Q5TB30 811 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 EMC10Q5UCC4 262 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 DPY19L3Q6ZPD9 716 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 GALNT4Q8N4A0 578 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 PLBD2Q8NHP8 589 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 BRIP1Q9BX63 1249 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 ARMT1Q9H993 441 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 PLEKHM1Q9Y4G2 1056 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 SPEF1Q9Y4P9 236 aa6.52□□□□□ -1.37
CCDC7-209ENST00000539197 SNUPNO95149 360 aaKnown RBP6.51□□□□□ -1.37
CCDC7-209ENST00000539197 IL33O95760 270 aa6.51□□□□□ -1.37
CCDC7-209ENST00000539197 SATB1Q01826 763 aa6.51□□□□□ -1.37
CCDC7-209ENST00000539197 ZIK1Q3SY52 487 aaPredicted RBP6.51□□□□□ -1.37
CCDC7-209ENST00000539197 L1TD1Q5T7N2 865 aaKnown RBP6.51□□□□□ -1.37
CCDC7-209ENST00000539197 MTHFD1LQ6UB35 978 aa6.51□□□□□ -1.37
CCDC7-209ENST00000539197 WASF1Q92558 559 aa6.51□□□□□ -1.37
CCDC7-209ENST00000539197 THAP7Q9BT49 309 aaPredicted RBP6.51□□□□□ -1.37
CCDC7-209ENST00000539197 CXorf36Q9H7Y0 433 aa6.51□□□□□ -1.37
CCDC7-209ENST00000539197 XPR1Q9UBH6 696 aa6.51□□□□□ -1.37
CCDC7-209ENST00000539197 SHOC2Q9UQ13 582 aa6.51□□□□□ -1.37
CCDC7-209ENST00000539197 E5RJQ4 531 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 UBE2Q2LH0YL09 131 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 INSIG1O15503 277 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 USP1O94782 785 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 ALDH2P05091 517 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 CHRM5P08912 532 aaPredicted RBP6.5□□□□□ -1.37
CCDC7-209ENST00000539197 KCNJ5P48544 419 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 ALDH5A1P51649 535 aaPredicted RBP6.5□□□□□ -1.37
CCDC7-209ENST00000539197 LRRC41Q15345 812 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 NANOGP1Q8N7R0 232 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 TERB1Q8NA31 727 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 SNX18Q96RF0 628 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 TRNAU1APQ9NX07 287 aaKnown RBP6.5□□□□□ -1.37
CCDC7-209ENST00000539197 CPA4Q9UI42 421 aa6.5□□□□□ -1.37
CCDC7-209ENST00000539197 CACNA1IQ9P0X4 2223 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 SNHG28P0DPA3 235 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 CYP2A6P11509 494 aaPredicted RBP6.49□□□□□ -1.37
CCDC7-209ENST00000539197 VIPR2P41587 438 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 RENBPP51606 427 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 UCP3P55916 312 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 MYO1EQ12965 1108 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 CYP1B1Q16678 543 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 CRELD2Q6UXH1 353 aaPredicted RBP6.49□□□□□ -1.37
CCDC7-209ENST00000539197 SERPINA13PQ6UXR4 307 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 PIGOQ8TEQ8 1089 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 MVB12AQ96EY5 273 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 FAM118BQ9BPY3 351 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 STAP2Q9UGK3 403 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 GABRQQ9UN88 632 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 LUC7L2Q9Y383 392 aaKnown RBP6.49□□□□□ -1.37
CCDC7-209ENST00000539197 AFG3L2Q9Y4W6 797 aa6.49□□□□□ -1.37
CCDC7-209ENST00000539197 MYMKA6NI61 221 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 AP4M1O00189 453 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 SOCS2O14508 198 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 CBSLP0DN79 551 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 IL1R2P27930 398 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 TKTP29401 623 aaKnown RBP6.48□□□□□ -1.37
CCDC7-209ENST00000539197 CBSP35520 551 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 PDE6CP51160 858 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 GPR162Q16538 588 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 RNASE12Q5GAN4 147 aaKnown RBP6.48□□□□□ -1.37
CCDC7-209ENST00000539197 MRPL10Q7Z7H8 261 aaKnown RBP6.48□□□□□ -1.37
CCDC7-209ENST00000539197 SLC15A3Q8IY34 581 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 NRACQ8N912 160 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 SOCS4Q8WXH5 440 aa6.48□□□□□ -1.37
CCDC7-209ENST00000539197 HSPBAP1Q96EW2 488 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms