RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 GLUD2P49448 558 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 KIF18AQ8NI77 898 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 PCED1BQ96HM7 432 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 NUP85Q9BW27 656 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 DUSP16Q9BY84 665 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 CRTAC1Q9NQ79 661 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 SSX2IPQ9Y2D8 614 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 PAXBP1Q9Y5B6 917 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 GBF1Q92538 1859 aa16.28■□□□□ 0.2
VAMP1-207ENST00000539047 A0A0U1RQJ8 604 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 ATMINO43313 823 aaPredicted RBP16.27■□□□□ 0.2
VAMP1-207ENST00000539047 SOD2P04179 222 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 GPD2P43304 727 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 MAGEA10P43363 369 aaPredicted RBP16.27■□□□□ 0.2
VAMP1-207ENST00000539047 PDE4CQ08493 712 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 TCEAL1Q15170 157 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 PSMD5Q16401 504 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 SLC39A12Q504Y0 691 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 DDX53Q86TM3 631 aaKnown RBP16.27■□□□□ 0.2
VAMP1-207ENST00000539047 TTC30AQ86WT1 665 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 ZDHHC17Q8IUH5 632 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 FUKQ8N0W3 1084 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 OR10T2Q8NGX3 314 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 SLC35G2Q8TBE7 412 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 ZNF564Q8TBZ8 553 aaPredicted RBP16.27■□□□□ 0.2
VAMP1-207ENST00000539047 ATRIPQ8WXE1 791 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 RIN2Q8WYP3 895 aaPredicted RBP16.27■□□□□ 0.2
VAMP1-207ENST00000539047 HSFY1Q96LI6 401 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 SELENOOQ9BVL4 669 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 B3GNT5Q9BYG0 378 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 ZCWPW1Q9H0M4 648 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 DMAP1Q9NPF5 467 aaPredicted RBP16.27■□□□□ 0.2
VAMP1-207ENST00000539047 DNAI1Q9UI46 699 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 PCDHB5Q9Y5E4 795 aa16.27■□□□□ 0.2
VAMP1-207ENST00000539047 MYBPHLA2RUH7 354 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 CTAGE9A4FU28 777 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 RRM1P23921 792 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 CTNNB1P35222 781 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 PLA2G4AP47712 749 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 HADHBP55084 474 aaKnown RBP16.26■□□□□ 0.19
VAMP1-207ENST00000539047 ZNF268Q14587 947 aaPredicted RBP16.26■□□□□ 0.19
VAMP1-207ENST00000539047 PTPN20Q4JDL3 420 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 DCUN1D2Q6PH85 259 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 SYT10Q6XYQ8 523 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 TMEM173Q86WV6 379 aaPredicted RBP16.26■□□□□ 0.19
VAMP1-207ENST00000539047 DNAAF5Q86Y56 855 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 SIX6OS1Q8N1H7 587 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 SLC35F6Q8N357 371 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 C3orf20Q8ND61 904 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 SP7Q8TDD2 431 aaPredicted RBP16.26■□□□□ 0.19
VAMP1-207ENST00000539047 C2orf15Q8WU43 125 aaKnown RBP16.26■□□□□ 0.19
VAMP1-207ENST00000539047 BCL7CQ8WUZ0 217 aaPredicted RBP16.26■□□□□ 0.19
VAMP1-207ENST00000539047 PIK3R5Q8WYR1 880 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 ARHGEF26Q96DR7 871 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 FUBP3Q96I24 572 aaKnown RBP eCLIP16.26■□□□□ 0.19
VAMP1-207ENST00000539047 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 DUSP10Q9Y6W6 482 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 MYO16Q9Y6X6 1858 aa16.26■□□□□ 0.19
VAMP1-207ENST00000539047 PLXNA4Q9HCM2 1894 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 CLDN5O00501 218 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 TRIM66O15016 1216 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 MTA2O94776 668 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 RGS7P49802 495 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 ARPP19P56211 112 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 GSCP56915 257 aaPredicted RBP16.25■□□□□ 0.19
VAMP1-207ENST00000539047 MRPL58Q14197 206 aaKnown RBP16.25■□□□□ 0.19
VAMP1-207ENST00000539047 PKDCCQ504Y2 493 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 RTP2Q5QGT7 225 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 CYP4A22Q5TCH4 519 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 KIAA0319Q5VV43 1072 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 OR6B2Q6IFH4 312 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 DAAM2Q86T65 1068 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 WDTC1Q8N5D0 677 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 TPCN2Q8NHX9 752 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 SPPL2BQ8TCT7 592 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 SLC35F5Q8WV83 523 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 UBE2Q2Q8WVN8 375 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 CLP1Q92989 425 aaKnown RBP16.25■□□□□ 0.19
VAMP1-207ENST00000539047 CPXM1Q96SM3 734 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 NAPGQ99747 312 aaPredicted RBP16.25■□□□□ 0.19
VAMP1-207ENST00000539047 LPIN3Q9BQK8 851 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 PLVAPQ9BX97 442 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 UBE2OQ9C0C9 1292 aaKnown RBP16.25■□□□□ 0.19
VAMP1-207ENST00000539047 ABCB6Q9NP58 842 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.25■□□□□ 0.19
VAMP1-207ENST00000539047 ABI2Q9NYB9 513 aaPredicted RBP16.25■□□□□ 0.19
VAMP1-207ENST00000539047 MTRRQ9UBK8 725 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 ANAPC7Q9UJX3 599 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 PCDHGC5Q9Y5F6 944 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 BACE2Q9Y5Z0 518 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 CAPN6Q9Y6Q1 641 aa16.25■□□□□ 0.19
VAMP1-207ENST00000539047 E5RJQ4 531 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 GOLGA8SH3BPF8 625 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 MYO1FO00160 1098 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 SART1O43290 800 aaKnown RBP16.24■□□□□ 0.19
VAMP1-207ENST00000539047 LPXNO60711 386 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 PALMO75781 387 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms