RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 LMTK2Q8IWU2 1503 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 THP07101 528 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 IMPDH2P12268 514 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 PSMA3P25788 255 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 NEK2P51955 445 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 CLEC16AQ2KHT3 1053 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 ZNF280DQ6N043 979 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 RBM12Q9NTZ6 932 aaKnown RBP17.45■□□□□ 0.38
SCARB1-205ENST00000538291 TGM2P21980 687 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 ZNF284Q2VY69 593 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 CARNMT1Q8N4J0 409 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 EME1Q96AY2 570 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 WNK4Q96J92 1243 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 ERP44Q9BS26 406 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 FRMD8P1Q9BZ68 369 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-205ENST00000538291 MTMR12Q9C0I1 747 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 USP15Q9Y4E8 981 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-205ENST00000538291 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 TRPM1Q7Z4N2 1603 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 MLNP12872 115 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 KLRC1P26715 233 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 TGFB2P61812 414 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 AMPD2Q01433 879 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 ELAVL2Q12926 359 aaKnown RBP17.45■□□□□ 0.38
SCARB1-205ENST00000538291 ANKS1AQ92625 1134 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 CROCC2H7BZ55 1655 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 F8W810 466 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 NKRFO15226 690 aaKnown RBP eCLIP17.45■□□□□ 0.385e-7■□□□□ 9.1
SCARB1-205ENST00000538291 PSTPIP1O43586 416 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 FBXO21O94952 628 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 AVPR1AP37288 418 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 ANXA11P50995 505 aaKnown RBP17.45■□□□□ 0.38
SCARB1-205ENST00000538291 AGBL2Q5U5Z8 902 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 AGAP9Q5VTM2 703 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 CHMP1BQ7LBR1 199 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 E2F7Q96AV8 911 aa17.45■□□□□ 0.38
SCARB1-205ENST00000538291 KLF6Q99612 283 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-205ENST00000538291 TRPC5OSA6NMA1 111 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 VPS26AO75436 327 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 BCAT1P54687 386 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 KRT78Q8N1N4 520 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 DPF3Q92784 378 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 CYFIP2Q96F07 1278 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 FAM167BQ9BTA0 163 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 LHX1P48742 406 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 MFSD4BQ5TF39 518 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 MROH9Q5TGP6 573 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 DDI1Q8WTU0 396 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 UBXN6Q9BZV1 441 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 ZCWPW1Q9H0M4 648 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 VIPAS39Q9H9C1 493 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 SYTL2Q9HCH5 934 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 IQSEC2Q5JU85 1478 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 RAD51CO43502 376 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 SLC37A4O43826 429 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 COILP38432 576 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-205ENST00000538291 KCNJ1P48048 391 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 GJB7Q6PEY0 223 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 AGGF1Q8N302 714 aaeCLIP17.44■□□□□ 0.387e-7■■■■■ 27.5
SCARB1-205ENST00000538291 COPS7BQ9H9Q2 264 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-205ENST00000538291 MAN1C1Q9NR34 630 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 ATN1P54259 1190 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-205ENST00000538291 PDK2Q15119 407 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 ERGIC2Q96RQ1 377 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 TSEN34Q9BSV6 310 aaKnown RBP17.44■□□□□ 0.38
SCARB1-205ENST00000538291 SCUBE2Q9NQ36 999 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 EIF3LQ9Y262 564 aaKnown RBP17.44■□□□□ 0.38
SCARB1-205ENST00000538291 PXDNLA1KZ92 1463 aa17.44■□□□□ 0.38
SCARB1-205ENST00000538291 CNTN1Q12860 1018 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CAMK2GQ13555 558 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 DEPDC1Q5TB30 811 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CLEC17AQ6ZS10 378 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CCNJLQ8IV13 435 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 PNKPQ96T60 521 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 EPN3Q9H201 632 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 PCDHB12Q9Y5F1 795 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 UBXN8O00124 270 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 VTNP04004 478 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CENPAP49450 140 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 MTM1Q13496 603 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 NFE2Q16621 373 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CCNI2Q6ZMN8 369 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 USP38Q8NB14 1042 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 DIS3LQ8TF46 1054 aaKnown RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 MTFR1LQ9H019 292 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 GPRC5CQ9NQ84 441 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CPA4Q9UI42 421 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 GGT7Q9UJ14 662 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 VPS28Q9UK41 221 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 PRIM2P49643 509 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 GEMIN4P57678 1058 aaKnown RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CCDC157Q569K6 752 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CACHD1Q5VU97 1274 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 LVRNQ6Q4G3 990 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 ZCCHC17Q9NP64 241 aaKnown RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 SYNCRIPO60506 623 aaKnown RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 WDR47O94967 919 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms