RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 CAPN10Q9HC96 672 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 ZDHHC4Q9NPG8 344 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 TMLHEQ9NVH6 421 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 UXTQ9UBK9 157 aaPredicted RBP12.02□□□□□ -0.49
CLPB-208ENST00000538021 OBSL1O75147 1896 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 ACACAQ13085 2346 aa12.02□□□□□ -0.49
CLPB-208ENST00000538021 TCRBV21S2A2A0A5A6 115 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 MYMKA6NI61 221 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 SYPP08247 313 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 NFICP08651 508 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 PLS3P13797 630 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 LIG4P49917 911 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLPB-208ENST00000538021 TSPY1Q01534 308 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 GUCY1B3Q02153 619 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 ZNF33AQ06730 810 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 C19orf57Q0VDD7 668 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 KCNB1Q14721 858 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 SAFBQ15424 915 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLPB-208ENST00000538021 KYAT1Q16773 422 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 EOGTQ5NDL2 527 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 C1orf186Q6ZWK4 172 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 SFTPA1Q8IWL2 248 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 IL17RCQ8NAC3 791 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 TSPAN18Q96SJ8 248 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 SCUBE2Q9NQ36 999 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 KCNG1Q9UIX4 513 aa12.01□□□□□ -0.49
CLPB-208ENST00000538021 C2orf78A6NCI8 922 aa12□□□□□ -0.49
CLPB-208ENST00000538021 JAK2O60674 1132 aa12□□□□□ -0.49
CLPB-208ENST00000538021 PRB1P04280 392 aa12□□□□□ -0.49
CLPB-208ENST00000538021 HDCP19113 662 aa12□□□□□ -0.49
CLPB-208ENST00000538021 SLC6A11P48066 632 aa12□□□□□ -0.49
CLPB-208ENST00000538021 TAF6P49848 677 aa12□□□□□ -0.49
CLPB-208ENST00000538021 ORC2Q13416 577 aaPredicted RBP12□□□□□ -0.49
CLPB-208ENST00000538021 NBR1Q14596 966 aa12□□□□□ -0.49
CLPB-208ENST00000538021 TMEM132DQ14C87 1099 aa12□□□□□ -0.49
CLPB-208ENST00000538021 ZRSR1Q15695 479 aaKnown RBP12□□□□□ -0.49
CLPB-208ENST00000538021 EMC10Q5UCC4 262 aa12□□□□□ -0.49
CLPB-208ENST00000538021 RABEPKQ7Z6M1 372 aa12□□□□□ -0.49
CLPB-208ENST00000538021 LRRC15Q8TF66 581 aa12□□□□□ -0.49
CLPB-208ENST00000538021 PNKPQ96T60 521 aa12□□□□□ -0.49
CLPB-208ENST00000538021 TIPINQ9BVW5 301 aa12□□□□□ -0.49
CLPB-208ENST00000538021 DNAAF2Q9NVR5 837 aaKnown RBP12□□□□□ -0.49
CLPB-208ENST00000538021 APOBEC2Q9Y235 224 aaKnown RBP12□□□□□ -0.49
CLPB-208ENST00000538021 STK24Q9Y6E0 443 aa12□□□□□ -0.49
CLPB-208ENST00000538021 PLXNB3Q9ULL4 1909 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 ASXL3Q9C0F0 2248 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 APC2O95996 2303 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 ANO9A1A5B4 782 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
CLPB-208ENST00000538021 HNRNPDLO14979 420 aaKnown RBP11.99□□□□□ -0.49
CLPB-208ENST00000538021 OGTO15294 1046 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 NOL4O94818 638 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 KAT7O95251 611 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 APODP05090 189 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 CYP2F1P24903 491 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 GUCY2CP25092 1073 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 RPL10AP62906 217 aaKnown RBP11.99□□□□□ -0.49
CLPB-208ENST00000538021 SLC14A1Q13336 389 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 NFE2Q16621 373 aaPredicted RBP11.99□□□□□ -0.49
CLPB-208ENST00000538021 GAB4Q2WGN9 574 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 PLEKHG6Q3KR16 790 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 TTC38Q5R3I4 469 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 KRT79Q5XKE5 535 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 SLC36A4Q6YBV0 504 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 CENPQQ7L2Z9 268 aaPredicted RBP11.99□□□□□ -0.49
CLPB-208ENST00000538021 FILIP1Q7Z7B0 1213 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 NAXDQ8IW45 347 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 CD302Q8IX05 232 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 RGL4Q8IZJ4 473 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 NSUN7Q8NE18 718 aaKnown RBP11.99□□□□□ -0.49
CLPB-208ENST00000538021 SPATA18Q8TC71 538 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 GTF3C6Q969F1 213 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 TRMT2BQ96GJ1 504 aaKnown RBP11.99□□□□□ -0.49
CLPB-208ENST00000538021 CRELD1Q96HD1 420 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 MYRFLQ96LU7 910 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 PNMA5Q96PV4 448 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 MSTO1Q9BUK6 570 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 RAB34Q9BZG1 259 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 GCNT4Q9P109 453 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 ARHGAP26Q9UNA1 814 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 SCN1AP35498 2009 aa11.99□□□□□ -0.49
CLPB-208ENST00000538021 URB1O60287 2271 aaKnown RBP11.98□□□□□ -0.49
CLPB-208ENST00000538021 PCDH15Q96QU1 1955 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 TCHHQ07283 1943 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 CEP192Q8TEP8 1941 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 PP2D1A8MPX8 630 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 LEFTY2O00292 366 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 SCAMP3O14828 347 aaKnown RBP11.98□□□□□ -0.49
CLPB-208ENST00000538021 FAM189A1O60320 539 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 ADAM23O75077 832 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 CYP17A1P05093 508 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 ADRB2P07550 413 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 CDC25AP30304 524 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 KDSRQ06136 332 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 MESP2Q0VG99 397 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 PDIA5Q14554 519 aa11.98□□□□□ -0.49
CLPB-208ENST00000538021 HSF5Q4G112 596 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms