RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ZBTB1Q9Y2K1 713 aa5.88□□□□□ -1.47
CSMD1-215ENST00000537824 IL5RAQ01344 420 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 CHRNB3Q05901 458 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 CYP51A1Q16850 503 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF790Q6PG37 636 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 C8orf4Q9NR00 106 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 NOD1Q9Y239 953 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 MTCL1Q9Y4B5 1905 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 KRT87PA6NCN2 255 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 PRR23AA6NEV1 266 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 BGNP21810 368 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 TUBA4AP68366 448 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 KCNT1Q5JUK3 1230 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 CCDC33Q8N5R6 958 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 COPRSQ9NQ92 184 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 CDC42BPAQ5VT25 1732 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 PNMA8CA0A1B0GUJ8 204 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 KPNA1P52294 538 aaPredicted RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 KNOP1Q1ED39 458 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF699Q32M78 642 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 DGKKQ5KSL6 1271 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 RNF220Q5VTB9 566 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 EGFLAMQ63HQ2 1017 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ZFP1Q6P2D0 407 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 P3H2Q8IVL5 708 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 FAM45AQ8TCE6 357 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 CHURC1Q8WUH1 139 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 SEMA6AQ9H2E6 1030 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 UVRAGQ9P2Y5 699 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 POLG2Q9UHN1 485 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 NCOA3Q9Y6Q9 1424 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 NOTOA8MTQ0 251 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 MAP2K7O14733 419 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 INPP4BO15327 924 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF806P0C7X5 589 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 GSSP48637 474 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 LSM3P62310 102 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 STXBP2Q15833 593 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 FAM102AQ5T9C2 384 aaPredicted RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ITPRIPL1Q6GPH6 555 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 TRIM65Q6PJ69 517 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 DHX35Q9H5Z1 703 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ASNSD1Q9NWL6 643 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 KLHL3Q9UH77 587 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 LAMC3Q9Y6N6 1575 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 PDE8AO60658 829 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 PSIP1O75475 530 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 BCAP31P51572 246 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 PKNOX1P55347 436 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 PRUNE1Q86TP1 453 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 POC5Q8NA72 575 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 DGCR14Q96DF8 476 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 SIPA1Q96FS4 1042 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 OXNAD1Q96HP4 312 aaPredicted RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 DDX50Q9BQ39 737 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 PIF1Q9H611 641 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 SLC12A6Q9UHW9 1150 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 KIF13AQ9H1H9 1805 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 WDR7Q9Y4E6 1490 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 STX5Q13190 355 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 NECTIN1Q15223 517 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 DGKDQ16760 1214 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 CYB5RLQ6IPT4 315 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 EGFL8Q99944 293 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 TASP1Q9H6P5 420 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 NEDD4P46934 1319 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 UHRF1BP1LA0JNW5 1464 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 FOLH1Q04609 750 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 LRRC74AQ0VAA2 488 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ALCAMQ13740 583 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 RUNDC3AQ59EK9 446 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 TTC27Q6P3X3 843 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 MIER2Q8N344 545 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 FAM71DQ8N9W8 422 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 OLFM1Q99784 485 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 DNAJC16Q9Y2G8 782 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF682O95780 498 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 EIF2S1P05198 315 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 SLC1A1P43005 524 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 GYG1P46976 350 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 SNX31Q8N9S9 440 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 KCTD14Q9BQ13 255 aaPredicted RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 DOLKQ9UPQ8 538 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 FAM20BO75063 409 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 RALBP11234 206 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 SP100P23497 879 aaPredicted RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 TDRD5Q8NAT2 981 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 FKBP9O95302 570 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 FKBP9P1Q75LS8 142 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 TMC3Q7Z5M5 1100 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 OR7A2PQ8NGA2 310 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 TAMM41Q96BW9 452 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF577Q9BSK1 485 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 CCDC162PA2VCL2 907 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 MTRF1O75570 445 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 GUCA1CO95843 209 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 PCP11498 1178 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 SERPINH1P50454 418 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 DDR2Q16832 855 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 FUT11Q495W5 492 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms