RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 TSPAN18Q96SJ8 248 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 NT5C1AQ9BXI3 368 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 CXCL16Q9H2A7 254 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 RABEP2Q9H5N1 569 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 NME7Q9Y5B8 376 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 NPTXRO95502 500 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 SETSIPP0DME0 302 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 DRD4P21917 467 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 KYNUQ16719 465 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 LIMS2Q7Z4I7 341 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 PRUNE1Q86TP1 453 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 MDM1Q8TC05 714 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 PWWP2AQ96N64 755 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 GCOM2Q9BZD3 368 aaPredicted RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 MIS12Q9H081 205 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 SETD4Q9NVD3 440 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 TPX2Q9ULW0 747 aaKnown RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 CAPN15O75808 1086 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 ZNF865P0CJ78 1059 aaPredicted RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 DARSP14868 501 aaKnown RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 MIPP30301 263 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 HOXC8P31273 242 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 RPL34P49207 117 aaKnown RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 MYO1EQ12965 1108 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 STAT4Q14765 748 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 LONRF1Q17RB8 773 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 TAOK1Q7L7X3 1001 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 VSIG1Q86XK7 387 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 EMC1Q8N766 993 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 PRCCQ92733 491 aaPredicted RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 HEXIM2Q96MH2 286 aaKnown RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 PEBP4Q96S96 227 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 CNPY3Q9BT09 278 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 SLC4A5Q9BY07 1137 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 ZNF408Q9H9D4 720 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 PPANQ9NQ55 473 aaKnown RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 TSPAN16Q9UKR8 245 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 ZNF148Q9UQR1 794 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 ATP5DP30049 168 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 AXLP30530 894 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 HIC1Q14526 733 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 QPCTQ16769 361 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 KIZQ2M2Z5 673 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 NOTUMQ6P988 496 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 FAM183BPQ6ZVS7 135 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 GSTA5Q7RTV2 222 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 RIBC1Q8N443 379 aaPredicted RBP9.77□□□□□ -0.84
UBE3B-207ENST00000537063 UHMK1Q8TAS1 419 aaKnown RBP9.77□□□□□ -0.84
UBE3B-207ENST00000537063 STK32AQ8WU08 396 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 RBM15Q96T37 977 aaKnown RBP eCLIP9.77□□□□□ -0.84
UBE3B-207ENST00000537063 ASNSD1Q9NWL6 643 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 GJD2Q9UKL4 321 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 ACTL7BQ9Y614 415 aa9.77□□□□□ -0.84
UBE3B-207ENST00000537063 TLDC2A0PJX2 215 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 APOC4-APOC2K7ER74 178 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 APOC2P02655 101 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 GPD1P21695 349 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 MAGEA4P43358 317 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 VPS41P49754 854 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 MKRN3Q13064 507 aaKnown RBP9.77□□□□□ -0.85
UBE3B-207ENST00000537063 RASA2Q15283 850 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 ARHGAP17Q68EM7 881 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 OLFML1Q6UWY5 402 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 VSTM1Q6UX27 236 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 UNC93AQ86WB7 457 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 TDRPQ86YL5 185 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 CHMP6Q96FZ7 201 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 TTC25Q96NG3 672 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 MRPL45Q9BRJ2 306 aaKnown RBP9.77□□□□□ -0.85
UBE3B-207ENST00000537063 EIF2AQ9BY44 585 aaKnown RBP9.77□□□□□ -0.85
UBE3B-207ENST00000537063 SYNCQ9H7C4 482 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 ZWILCHQ9H900 591 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 SLC5A4Q9NY91 659 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 SNTG2Q9NY99 539 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 USP18Q9UMW8 372 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 PPEF2O14830 753 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 CPP00450 1065 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 ZSCAN5DPP0CG00 497 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 ETS1P14921 441 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 MAGEA9P43362 315 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 SLCO1A2P46721 670 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 OTUD4Q01804 1114 aaKnown RBP9.77□□□□□ -0.85
UBE3B-207ENST00000537063 MAP2K5Q13163 448 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 GOLGA7BQ2TAP0 167 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 FAM102AQ5T9C2 384 aaPredicted RBP9.77□□□□□ -0.85
UBE3B-207ENST00000537063 MICALCLQ6ZW33 695 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 TMEM110Q86TL2 294 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 TTC30AQ86WT1 665 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 ACTL9Q8TC94 416 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 TUBGCP4Q9UGJ1 667 aa9.77□□□□□ -0.85
UBE3B-207ENST00000537063 DDX20Q9UHI6 824 aaKnown RBP9.77□□□□□ -0.85
UBE3B-207ENST00000537063 SMIM23A6NLE4 172 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 ZNF487B1APH4 448 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 E5RJQ4 531 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 ALOX15BO15296 676 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 CD48P09326 243 aa9.76□□□□□ -0.85
UBE3B-207ENST00000537063 PECAM1P16284 738 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-207ENST00000537063 GCAP28676 217 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms