RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 HACE1Q8IYU2 909 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 ZCCHC9Q8N567 271 aaKnown RBP14.27□□□□□ -0.13
SMG6-203ENST00000536871 TBCBQ99426 244 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 HERPUD2Q9BSE4 406 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 SLC12A6Q9UHW9 1150 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 CYTH4Q9UIA0 394 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 SHOC2Q9UQ13 582 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 EVPLQ92817 2033 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 DNALI1O14645 258 aaPredicted RBP14.26□□□□□ -0.13
SMG6-203ENST00000536871 GJB6O95452 261 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 KDELR1P24390 212 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 HOXC8P31273 242 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 HPDP32754 393 aaPredicted RBP14.26□□□□□ -0.13
SMG6-203ENST00000536871 ZNF157P51786 506 aaPredicted RBP14.26□□□□□ -0.13
SMG6-203ENST00000536871 MAGOHP61326 146 aaKnown RBP14.26□□□□□ -0.13
SMG6-203ENST00000536871 SNX17Q15036 470 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 OASLQ15646 514 aaKnown RBP14.26□□□□□ -0.13
SMG6-203ENST00000536871 BOLA3Q53S33 107 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 FAM47CQ5HY64 1035 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 IZUMO3Q5VZ72 239 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 HIBCHQ6NVY1 386 aaPredicted RBP14.26□□□□□ -0.13
SMG6-203ENST00000536871 MICALCLQ6ZW33 695 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 DPH6Q7L8W6 267 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 RIBC1Q8N443 379 aaPredicted RBP14.26□□□□□ -0.13
SMG6-203ENST00000536871 SLC35B2Q8TB61 432 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 OSMRQ99650 979 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 CDC42EP4Q9H3Q1 356 aaKnown RBP14.26□□□□□ -0.13
SMG6-203ENST00000536871 GDAP2Q9NXN4 497 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 GGA2Q9UJY4 613 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 SNX9Q9Y5X1 595 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 RALGAPA2Q2PPJ7 1873 aa14.26□□□□□ -0.13
SMG6-203ENST00000536871 AKR1A1P14550 325 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 ACADSBP45954 432 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 STAT4Q14765 748 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 PDK2Q15119 407 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 PTGISQ16647 500 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 SV2CQ496J9 727 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 FBXO47Q5MNV8 452 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 C9orf57Q5W0N0 161 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 KAZNQ674X7 775 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 TMEM110Q86TL2 294 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 RSPH3Q86UC2 560 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 CCDC25Q86WR0 208 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 KCTD6Q8NC69 237 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 JOSD2Q8TAC2 188 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 TEKT4Q8WW24 435 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 RAPGEF5Q92565 580 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 CFAP57Q96MR6 1250 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 SLC4A5Q9BY07 1137 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 HMGXB4Q9UGU5 601 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 TPX2Q9ULW0 747 aaKnown RBP14.25□□□□□ -0.13
SMG6-203ENST00000536871 USP18Q9UMW8 372 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 C3orf70A6NLC5 250 aaPredicted RBP14.25□□□□□ -0.13
SMG6-203ENST00000536871 C2CD4BA6NLJ0 364 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 PI4K2BG5E9Z4 385 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 APOC4-APOC2K7ER74 178 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 M0QZ92 97 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 NDUFAB1O14561 156 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 TP73O15350 636 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 ADCY6O43306 1168 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 RECQL4O94761 1208 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 TRUB2O95900 331 aaKnown RBP14.25□□□□□ -0.13
SMG6-203ENST00000536871 IGHA2P01877 340 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 APOC2P02655 101 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 MYL3P08590 195 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 FGFR4P22455 802 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 MAGEA9P43362 315 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 SREBF2Q12772 1141 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 GOLGA7BQ2TAP0 167 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 PKDCCQ504Y2 493 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 TNFAIP8L3Q5GJ75 292 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 DAB2IPQ5VWQ8 1189 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 CST9Q5W186 159 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 C7orf31Q8N865 590 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 TNIP3Q96KP6 325 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 MAK16Q9BXY0 300 aaKnown RBP14.25□□□□□ -0.13
SMG6-203ENST00000536871 PRDM16Q9HAZ2 1276 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 DNPEPQ9ULA0 475 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 PIN4Q9Y237 131 aaKnown RBP14.25□□□□□ -0.13
SMG6-203ENST00000536871 GINS2Q9Y248 185 aa14.25□□□□□ -0.13
SMG6-203ENST00000536871 ATXN2Q99700 1313 aaKnown RBP14.25□□□□□ -0.13
SMG6-203ENST00000536871 PIRO00625 290 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 PRPSAP2O60256 369 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 CAND2O75155 1236 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 DUSP11O75319 330 aaKnown RBP14.24□□□□□ -0.13
SMG6-203ENST00000536871 TOMM70O94826 608 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 KRT10P13645 584 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 MIPP30301 263 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 STIP1P31948 543 aaKnown RBP14.24□□□□□ -0.13
SMG6-203ENST00000536871 MMP13P45452 471 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 ARSEP51690 589 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 PLCB3Q01970 1234 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 NR1H3Q13133 447 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 FSCN1Q16658 493 aaKnown RBP14.24□□□□□ -0.13
SMG6-203ENST00000536871 P3H1Q32P28 736 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 ATP13A4Q4VNC1 1196 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 OR6B2Q6IFH4 312 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms