RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TBXAS1P24557 533 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CTNNA2P26232 953 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CHRNA3P32297 505 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GBP1P32455 592 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CLCNKBP51801 687 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 EIF3BP55884 814 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DR1Q01658 176 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 B4GALNT4Q76KP1 1039 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 RBBP8NLQ8NC74 664 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TWNKQ96RR1 684 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 BCO2Q9BYV7 579 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZDHHC18Q9NUE0 388 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PCYOX1Q9UHG3 505 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SNX9Q9Y5X1 595 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 LAMA3Q16787 3333 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 MYO1FO00160 1098 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PIRO00625 290 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PHF2O75151 1096 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PTGIRP43119 386 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 LIG3P49916 1009 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ATP1A2P50993 1020 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 FMO1Q01740 532 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CYP1B1Q16678 543 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.67□□□□□ -0.221e-10■■■■■ 46
CDK5RAP3-202ENST00000536708 ENOSF1Q7L5Y1 443 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PGBD4Q96DM1 585 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 RUNDC3BQ96NL0 473 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 FMO2Q99518 471 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 VRTNQ9H8Y1 702 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 UVRAGQ9P2Y5 699 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GGA2Q9UJY4 613 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GTF3C4Q9UKN8 822 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NME7Q9Y5B8 376 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TIMP1P01033 207 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 MMEP08473 750 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CFHP08603 1231 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ACRP10323 421 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CYP11B1P15538 503 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 RAG1P15918 1043 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ATICP31939 592 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 FAM189BP81408 668 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CDR2Q01850 454 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SKIDA1Q1XH10 827 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZNF280BQ86YH2 543 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 C3orf20Q8ND61 904 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 APBB2Q92870 758 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TMEM161AQ9NX61 479 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SLC12A6Q9UHW9 1150 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 RASAL2Q9UJF2 1139 aa13.67□□□□□ -0.22
CDK5RAP3-202ENST00000536708 I3L4J1 428 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PODXLO00592 558 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 KIAA0355O15063 1070 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 XPOTO43592 962 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ITGB1P05556 798 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NUDT17P0C025 328 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SKIP12755 728 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CYP3A5P20815 502 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 COMTP21964 271 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 LRPAP1P30533 357 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PDE6CP51160 858 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZNF132P52740 706 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DHX9Q08211 1270 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GRIK3Q13003 919 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZNF211Q13398 564 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 JAMLQ86YT9 394 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 LRRC52Q8N7C0 313 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PRELID2Q8N945 189 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 UBLCP1Q8WVY7 318 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DDX1Q92499 740 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 KRT35Q92764 455 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 MRPL45Q9BRJ2 306 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TRIM51Q9BSJ1 452 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 FAM129AQ9BZQ8 928 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TBC1D13Q9NVG8 400 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PCDHA3Q9Y5H8 950 aa13.66□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NDUFAB1O14561 156 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DDHD2O94830 711 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 UPP2O95045 317 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 STAU1O95793 577 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CDR1P51861 262 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GUCY1A3Q02108 690 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CCDC142Q17RM4 750 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SOWAHAQ2M3V2 549 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NAA35Q5VZE5 725 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TTC19Q6DKK2 380 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 C7orf61Q8IZ16 206 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CRIPAKQ8N1N5 446 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZNF560Q96MR9 790 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DPH5Q9H2P9 285 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SLC38A7Q9NVC3 462 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GEMIN8Q9NWZ8 242 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 KPNA7A9QM74 516 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 EOMESO95936 686 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms