RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 IQCDQ96DY2 449 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 TSC22D3Q99576 134 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 FZD8Q9H461 694 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 TMEM134Q9H6X4 195 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 RAB21Q9UL25 225 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 ZNF148Q9UQR1 794 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 NR2E1Q9Y466 385 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 TRIOBPQ9H2D6 2365 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.65□□□□□ -1.02
ABCA4-207ENST00000536513 SMIM28A0A1B0GU29 152 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 CYB561D2O14569 222 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 TTI1O43156 1089 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 F2P00734 622 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 HMBSP08397 361 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 KRT3P12035 628 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 GHRHRQ02643 423 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 C15orf59Q2T9L4 293 aaPredicted RBP8.65□□□□□ -1.02
ABCA4-207ENST00000536513 DENND2CQ68D51 928 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 CYB5D1Q6P9G0 228 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 ANKRD42Q8N9B4 389 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 APPL2Q8NEU8 664 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 ST13P5Q8NFI4 369 aaPredicted RBP8.65□□□□□ -1.02
ABCA4-207ENST00000536513 LMO3Q8TAP4 145 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 NSMCE1Q8WV22 266 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 SHC3Q92529 594 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 EDEM1Q92611 657 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 SIK2Q9H0K1 926 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 LRRC4Q9HBW1 653 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 SEPT10Q9P0V9 454 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 TSPAN16Q9UKR8 245 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 GNEQ9Y223 722 aaKnown RBP8.65□□□□□ -1.02
ABCA4-207ENST00000536513 PLAAQ9Y263 795 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 MROH7Q68CQ1 1323 aa8.65□□□□□ -1.02
ABCA4-207ENST00000536513 GMNCA6NCL1 334 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.03
ABCA4-207ENST00000536513 FKTNO75072 461 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 TCF4P15884 667 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 ACO1P21399 889 aaKnown RBP8.65□□□□□ -1.03
ABCA4-207ENST00000536513 ACLYP53396 1101 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 MAP3K7CLP57077 242 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 TAF12Q16514 161 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 KIAA1841Q6NSI8 718 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 EMBQ6PCB8 327 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 SLC2A14Q8TDB8 520 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 ELAC2Q9BQ52 826 aaKnown RBP8.65□□□□□ -1.03
ABCA4-207ENST00000536513 NT5C1AQ9BXI3 368 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 TRIM4Q9C037 500 aa8.65□□□□□ -1.03
ABCA4-207ENST00000536513 ABI2Q9NYB9 513 aaPredicted RBP8.65□□□□□ -1.03
ABCA4-207ENST00000536513 PRUNE2Q8WUY3 3088 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 RNF8O76064 485 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 CHRNB2P17787 502 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 TBXAS1P24557 533 aaPredicted RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 CYP2C18P33260 490 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 CETN2P41208 172 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 SLCO1A2P46721 670 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 CLCNKBP51801 687 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 SLC8A3P57103 927 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 MRPS6P82932 125 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 MDH1BQ5I0G3 518 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 FBXO47Q5MNV8 452 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 FAM228AQ86W67 206 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 FAM71AQ8IYT1 594 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 HACE1Q8IYU2 909 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 SYCE1Q8N0S2 351 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 ARRDC4Q8NCT1 418 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 C18orf8Q96DM3 657 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 MAK16Q9BXY0 300 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 EDEM3Q9BZQ6 932 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 TCRBV7S2A1N4TA0A589 114 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 PGRMC1O00264 195 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 DAPK3O43293 454 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 GAS2O43903 313 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 PIAS1O75925 651 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 SYF2O95926 243 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 ASS1P00966 412 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 HMGCRP04035 888 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 THP07101 528 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 PDGFRAP16234 1089 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 PTPN11Q06124 597 aaPredicted RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 MCL1Q07820 350 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 CRYMQ14894 314 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 SH3PXD2AQ5TCZ1 1133 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 C1orf228Q6PIY5 440 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 ALG3Q92685 438 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 STRA6Q9BX79 667 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 EPN3Q9H201 632 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 NOP53Q9NZM5 478 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 SIX4Q9UIU6 781 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 C5orf42Q9H799 3197 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 CNTNAP2Q9UHC6 1331 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 GTPBP10A4D1E9 387 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 E5RJQ4 531 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 AP1G2O75843 785 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 ACRP10323 421 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 CARSP49589 748 aaKnown RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 SOX4Q06945 474 aaPredicted RBP8.64□□□□□ -1.03
ABCA4-207ENST00000536513 KRT81Q14533 505 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 C10orf76Q5T2E6 689 aa8.64□□□□□ -1.03
ABCA4-207ENST00000536513 PPP1R26Q5T8A7 1209 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms