RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 IKBKBO14920 756 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 EXOC3O60645 756 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 TACC1O75410 805 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 PAPSS2O95340 614 aaPredicted RBP13.33□□□□□ -0.28
PRKDC-207ENST00000536483 PRAMEF12O95522 483 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 FGF19O95750 216 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 CST3P01034 146 aaPredicted RBP13.33□□□□□ -0.28
PRKDC-207ENST00000536483 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 ATF6P18850 670 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 WEE1P30291 646 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 ATICP31939 592 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 CYP2J2P51589 502 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
PRKDC-207ENST00000536483 SOWAHAQ2M3V2 549 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 FAM171BQ6P995 826 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 PLEKHO2Q8TD55 490 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 BPIFB1Q8TDL5 484 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 GIPC2Q8TF65 315 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 FNBP1Q96RU3 617 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 GTPBP4Q9BZE4 634 aaKnown RBP13.33□□□□□ -0.28
PRKDC-207ENST00000536483 SMG9Q9H0W8 520 aaKnown RBP13.33□□□□□ -0.28
PRKDC-207ENST00000536483 XYLT2Q9H1B5 865 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 TASP1Q9H6P5 420 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 IL21Q9HBE4 155 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 SEMA4GQ9NTN9 838 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 OBP2AQ9NY56 170 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 EPG5Q9HCE0 2579 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 TCHHQ07283 1943 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 TSC2P49815 1807 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 ACACBO00763 2458 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-207ENST00000536483 SOBPA7XYQ1 873 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 LRP3O75074 770 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-207ENST00000536483 TNNI1P19237 187 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 WARSP23381 471 aaKnown RBP13.32□□□□□ -0.28
PRKDC-207ENST00000536483 CNR2P34972 360 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 FAM160A1Q05DH4 1040 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 CCINQ13939 588 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 VEPH1Q14D04 833 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 CFAP221Q4G0U5 840 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 ZCWPW2Q504Y3 356 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 LMBRD2Q68DH5 695 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-207ENST00000536483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-207ENST00000536483 RDH13Q8NBN7 331 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 NETO1Q8TDF5 533 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRKDC-207ENST00000536483 FAM84AQ96KN4 292 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 CEP295NLQ96MC4 621 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 SNX9Q9Y5X1 595 aa13.32□□□□□ -0.28
PRKDC-207ENST00000536483 SDK1Q7Z5N4 2213 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 SLC30A4O14863 429 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 CALUO43852 315 aaPredicted RBP13.31□□□□□ -0.28
PRKDC-207ENST00000536483 C4BPAP04003 597 aaKnown RBP13.31□□□□□ -0.28
PRKDC-207ENST00000536483 NR3C1P04150 777 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 KRT19P08727 400 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 DLATP10515 647 aaKnown RBP13.31□□□□□ -0.28
PRKDC-207ENST00000536483 PCSK1P29120 753 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 CDC25CP30307 473 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 PLCB2Q00722 1185 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 MYL7Q01449 175 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 TSPY1Q01534 308 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 BFSP1Q12934 665 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 TAF12Q16514 161 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 CSRP2Q16527 193 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 EDRF1Q3B7T1 1238 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 INTS6LQ5JSJ4 861 aaKnown RBP13.31□□□□□ -0.28
PRKDC-207ENST00000536483 PRR23CQ6ZRP0 262 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 CEP68Q76N32 757 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 OSTM1Q86WC4 334 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 CCDC127Q96BQ5 260 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 GCNAQ96QF7 691 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 TMLHEQ9NVH6 421 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 THG1LQ9NWX6 298 aaKnown RBP13.31□□□□□ -0.28
PRKDC-207ENST00000536483 DDX43Q9NXZ2 648 aaKnown RBP13.31□□□□□ -0.28
PRKDC-207ENST00000536483 ZMYM5Q9UJ78 669 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 R3HCC1Q9Y3T6 440 aaKnown RBP13.31□□□□□ -0.28
PRKDC-207ENST00000536483 PCDHB5Q9Y5E4 795 aa13.31□□□□□ -0.28
PRKDC-207ENST00000536483 GOLGA6L4A6NEF3 574 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 LRRIQ3A6PVS8 624 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-207ENST00000536483 GDF9O60383 454 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 MAGEA11P43364 429 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 ITPRIPL2Q3MIP1 535 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 ZACNQ401N2 412 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 C1orf220Q5T0J3 134 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 CMTM8Q8IZV2 173 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 SYNPOQ8N3V7 929 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 FAM160A2Q8N612 972 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-207ENST00000536483 NOC3LQ8WTT2 800 aaKnown RBP13.3□□□□□ -0.28
PRKDC-207ENST00000536483 SYAP1Q96A49 352 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-207ENST00000536483 GKN1Q9NS71 199 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 RMND1Q9NWS8 449 aa13.3□□□□□ -0.28
PRKDC-207ENST00000536483 ABI2Q9NYB9 513 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms