RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ZBTB16Q05516 673 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TRIM67Q6ZTA4 783 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 SV2AQ7L0J3 742 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TAS1R3Q7RTX0 852 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 MRRFQ96E11 262 aaKnown RBP14.65□□□□□ -0.06
LIG1-203ENST00000536218 SPON1Q9HCB6 807 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 GGPS1O95749 300 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 KRT5P13647 590 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TNNI1P19237 187 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 DAB2IPQ5VWQ8 1189 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 C9orf131Q5VYM1 1079 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TTC27Q6P3X3 843 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TMEM110Q86TL2 294 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 PRUNE1Q86TP1 453 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TRIM50Q86XT4 487 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 FAM161BQ96MY7 647 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 ECSITQ9BQ95 431 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 NTPCRQ9BSD7 190 aaKnown RBP14.65□□□□□ -0.06
LIG1-203ENST00000536218 BTBD10Q9BSF8 475 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TXNRD2Q9NNW7 524 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 ANGPTL2Q9UKU9 493 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 RPL26L1Q9UNX3 145 aaKnown RBP14.65□□□□□ -0.06
LIG1-203ENST00000536218 NFASCO94856 1347 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 RLFQ13129 1914 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 UMODL1Q5DID0 1318 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 SYNGAP1Q96PV0 1343 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 Q3C1V9 767 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 SLFN11Q7Z7L1 901 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 SLC7A3Q8WY07 619 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 ALG3Q92685 438 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 EBF3Q9H4W6 596 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 ARL8BQ9NVJ2 186 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 NAALADL1Q9UQQ1 740 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 K7ERI5 159 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 PHF2O75151 1096 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 ZFXP17010 805 aaPredicted RBP14.64□□□□□ -0.07
LIG1-203ENST00000536218 PTGIRP43119 386 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 CPA2P48052 419 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 DRG2P55039 364 aaKnown RBP14.64□□□□□ -0.07
LIG1-203ENST00000536218 OVGP1Q12889 678 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 GRAMD4Q6IC98 578 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 CLNKQ7Z7G1 428 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 GPD1LQ8N335 351 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 SMYD1Q8NB12 490 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 DNERQ8NFT8 737 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 CFAP61Q8NHU2 1237 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 PRPF31Q8WWY3 499 aaKnown RBP14.64□□□□□ -0.07
LIG1-203ENST00000536218 TARS2Q9BW92 718 aaKnown RBP14.64□□□□□ -0.07
LIG1-203ENST00000536218 ZNF408Q9H9D4 720 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 PDLIM7Q9NR12 457 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 RAB20Q9NX57 234 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 NENFQ9UMX5 172 aa14.64□□□□□ -0.07
LIG1-203ENST00000536218 A0A0G2JND7 137 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 WDR91A4D1P6 747 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 FAM47DPA6NHR8 397 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 PODXLO00592 558 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 DDX3YO15523 660 aaKnown RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 STK10O94804 968 aaKnown RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 ASMTLO95671 621 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 PABPC4LP0CB38 370 aaKnown RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 CETN2P41208 172 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 GRIA2P42262 883 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 CYP24A1Q07973 514 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 MOGSQ13724 837 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 CYLC2Q14093 348 aaPredicted RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 BTG3Q14201 252 aaPredicted RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 KIF22Q14807 665 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 TRIP13Q15645 432 aaPredicted RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 LRRC8BQ6P9F7 803 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 PHLDB2Q86SQ0 1253 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 NOP9Q86U38 636 aaKnown RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 RIOX2Q8IUF8 465 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 PRELID2Q8N945 189 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 FBXL13Q8NEE6 735 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 HSPBAP1Q96EW2 488 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 PWWP2AQ96N64 755 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 PCDHB18PQ96TA0 734 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 GSTTP1A0A1W2PQM5 241 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 STAM2O75886 525 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 CETPP11597 493 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 GLRA2P23416 452 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 VARSP26640 1264 aaKnown RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 CHKAP35790 457 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 VPS41P49754 854 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 STAT5BP51692 787 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 MAP7D1Q3KQU3 841 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 TRMT10CQ7L0Y3 403 aaKnown RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 RFFLQ8WZ73 363 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 NT5C1BQ96P26 610 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 IL1RAPL1Q9NZN1 696 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 ASIC3Q9UHC3 531 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 COG5Q9UP83 839 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 TRAFD1O14545 582 aaPredicted RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 P4HA2O15460 535 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 TMEM253P0C7T8 217 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 CHRNA3P32297 505 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 TCF7P36402 384 aaPredicted RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 MFAP3P55082 362 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 WNT7BP56706 349 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms