RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 HIBCHQ6NVY1 386 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-202ENST00000535906 ALLCQ8N6M5 410 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 MCRS1Q96EZ8 462 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 EIF2AQ9BY44 585 aaKnown RBP14.06□□□□□ -0.16
VPS33B-202ENST00000535906 OSBPL7Q9BZF2 842 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 CCDC134Q9H6E4 229 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-202ENST00000535906 INTS9Q9NV88 658 aaKnown RBP14.06□□□□□ -0.16
VPS33B-202ENST00000535906 HES2Q9Y543 173 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 PIK3R2O00459 728 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 PPEF2O14830 753 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 CELF2O95319 508 aaKnown RBP14.06□□□□□ -0.16
VPS33B-202ENST00000535906 STAU1O95793 577 aaKnown RBP14.06□□□□□ -0.16
VPS33B-202ENST00000535906 NT5DC4Q86YG4 428 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 BBOF1Q8ND07 529 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 LENG1Q96BZ8 264 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-202ENST00000535906 TMEM121Q9BTD3 319 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 RNF19AQ9NV58 838 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 PCSK1NQ9UHG2 260 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 CPA4Q9UI42 421 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 GOLGA6L7A0A1B0GV03 622 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 RRN3P2A6NIE6 340 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 SLC15A5A6NIM6 579 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 A6NJR5 290 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 KRT7P08729 469 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 CD48P09326 243 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 SMIM10L2AP0DMW4 78 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 SMIM10L2BP0DMW5 78 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 ARSEP51690 589 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 VCPP55072 806 aaKnown RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 DYNLT1P63172 113 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 HIC1Q14526 733 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 TAF5Q15542 800 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 CATSPER4Q7RTX7 472 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 SUGP1Q8IWZ8 645 aaKnown RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 CCDC13Q8IYE1 715 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 C2orf69Q8N8R5 385 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 P3H4Q92791 437 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 PIWIL1Q96J94 861 aaKnown RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 SERPINB12Q96P63 405 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 OSMRQ99650 979 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 NINJ2Q9NZG7 142 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 TSPAN16Q9UKR8 245 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 DRG1Q9Y295 367 aaKnown RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 PFKMP08237 780 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 KDELR1P24390 212 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 HNRNPH1P31943 449 aaKnown RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 PLCB3Q01970 1234 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 HADHQ16836 314 aaKnown RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 DCAF4L1Q3SXM0 396 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 CCDC38Q502W7 563 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 FAM102AQ5T9C2 384 aaPredicted RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 SLC27A1Q6PCB7 646 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 EXOC3L1Q86VI1 746 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 NT5C1AQ9BXI3 368 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 GCOM2Q9BZD3 368 aaPredicted RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 FLRT1Q9NZU1 646 aa14.05□□□□□ -0.16
VPS33B-202ENST00000535906 GNEQ9Y223 722 aaKnown RBP14.05□□□□□ -0.16
VPS33B-202ENST00000535906 NRCAMQ92823 1304 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 DNALI1O14645 258 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 F2P00734 622 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 MIPP30301 263 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 SH3PXD2AQ5TCZ1 1133 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 TRNP1Q6NT89 227 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 LCLAT1Q6UWP7 414 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 SLC35B2Q8TB61 432 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 NKD2Q969F2 451 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 SNX27Q96L92 541 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 C9orf72Q96LT7 481 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 PRMT1Q99873 361 aaKnown RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 MRPL45Q9BRJ2 306 aaKnown RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 PLEKHA5Q9HAU0 1116 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 NME7Q9Y5B8 376 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 SNX9Q9Y5X1 595 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 E5RJQ4 531 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 CST8O60676 142 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 ITGAVP06756 1048 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 MYO1EQ12965 1108 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 GPS1Q13098 491 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 ZBTB6Q15916 424 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 LACTB2Q53H82 288 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 RAB6CQ53S08 254 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 ANKRD20A8PQ5CZ79 823 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 GLRA4Q5JXX5 417 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 PPP1R26Q5T8A7 1209 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 OLFML2BQ68BL8 750 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 PIGWQ7Z7B1 504 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 ZCCHC9Q8N567 271 aaKnown RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 CCDC197Q8NCU1 140 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 ACTL9Q8TC94 416 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 IPO4Q8TEX9 1081 aaKnown RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 C18orf25Q96B23 403 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 RBM15Q96T37 977 aaKnown RBP eCLIP14.04□□□□□ -0.16
VPS33B-202ENST00000535906 RAB6CQ9H0N0 254 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 C10orf88Q9H8K7 445 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 CTNNAL1Q9UBT7 734 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 USP18Q9UMW8 372 aa14.04□□□□□ -0.16
VPS33B-202ENST00000535906 EFR3BQ9Y2G0 817 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms