RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CEP295NLQ96MC4 621 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 TUBGCP2Q9BSJ2 902 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 MED10Q9BTT4 135 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 FAM49BQ9NUQ9 324 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 ATP8B3O60423 1300 aa24.14■■□□□ 1.46
SFSWAP-204ENST00000535399 RAD23BP54727 409 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 ZNF394Q53GI3 561 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 TCP11X2Q5H9J9 407 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 MIIPQ5JXC2 388 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 TMEM150AQ86TG1 271 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 PPM1KQ8N3J5 372 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 SLC4A11Q8NBS3 891 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 SLC2A14Q8TDB8 520 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 RSAD2Q8WXG1 361 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 KAT5Q92993 513 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 MYRFLQ96LU7 910 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 ZSWIM3Q96MP5 696 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 CRACR2AQ9BSW2 395 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 FUCA2Q9BTY2 467 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 EPHX3Q9H6B9 360 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 GCNT4Q9P109 453 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 IGSF9Q9P2J2 1179 aa24.14■■□□□ 1.45
SFSWAP-204ENST00000535399 GTPBP10A4D1E9 387 aaKnown RBP24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 F11P03951 625 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 EEF1GP26641 437 aaKnown RBP24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 YWHAEP62258 255 aaKnown RBP24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 MYL5Q02045 173 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 VWA3BQ502W6 1294 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 PARM1Q6UWI2 310 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 ST13P5Q8NFI4 369 aaPredicted RBP24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 NXPE3Q969Y0 559 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 TRMT2BQ96GJ1 504 aaKnown RBP24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 SMARCD1Q96GM5 515 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 TMEM176AQ96HP8 235 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 HNRNPABQ99729 332 aaKnown RBP24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 ATXN3LQ9H3M9 355 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 NDST4Q9H3R1 872 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 FANCLQ9NW38 375 aa24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 MAGED2Q9UNF1 606 aaPredicted RBP24.13■■□□□ 1.45
SFSWAP-204ENST00000535399 ALADP13716 330 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 PRKCSHP14314 528 aaPredicted RBP24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 TRIM21P19474 475 aaKnown RBP24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 ACO1P21399 889 aaKnown RBP24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 ANXA13P27216 316 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 CDC25CP30307 473 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 NCAPHQ15003 741 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 ANO6Q4KMQ2 910 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 STXBP5Q5T5C0 1151 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 PHLDB3Q6NSJ2 640 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 GBP6Q6ZN66 633 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 RRAGAQ7L523 313 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 FGF14Q92915 247 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 CYFIP2Q96F07 1278 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 KREMEN1Q96MU8 473 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 KCNK16Q96T55 309 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 DNAI2Q9GZS0 605 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 KRT82Q9NSB4 513 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 SORCS3Q9UPU3 1222 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 NUMBLQ9Y6R0 609 aa24.12■■□□□ 1.45
SFSWAP-204ENST00000535399 AP1G2O75843 785 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 LETM1O95202 739 aaPredicted RBP24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 SLC9A1P19634 815 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 USP46P62068 366 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 ZXDAP98168 799 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 GCNT1Q02742 428 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 EXOC3L4Q17RC7 722 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 FAM78AQ5JUQ0 283 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 TRIM65Q6PJ69 517 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 ZMIZ2Q8NF64 920 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 HEXIM2Q96MH2 286 aaKnown RBP24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 SMOQ99835 787 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 RPP25Q9BUL9 199 aaKnown RBP24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 TTLL2Q9BWV7 592 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 SMOC2Q9H3U7 446 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 CSNK1G1Q9HCP0 422 aa24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 DMAP1Q9NPF5 467 aaPredicted RBP24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 UXTQ9UBK9 157 aaPredicted RBP24.11■■□□□ 1.45
SFSWAP-204ENST00000535399 TADA3O75528 432 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 BEST1O76090 585 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 FCARP24071 287 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 PON1P27169 355 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 ADORA2BP29275 332 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 CYP4F8P98187 520 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 TDGQ13569 410 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 PPP1R26Q5T8A7 1209 aaPredicted RBP24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 DENND5BQ6ZUT9 1274 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 MTSS1LQ765P7 747 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 SLC44A3Q8N4M1 653 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 ASB16Q96NS5 453 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 GCNAQ96QF7 691 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 GPR88Q9GZN0 384 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 TAB2Q9NYJ8 693 aa24.1■■□□□ 1.45
SFSWAP-204ENST00000535399 FAM200BP0CF97 657 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 APBA1Q02410 837 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 KRT31Q15323 416 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 SKOR2Q2VWA4 1001 aaPredicted RBP24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 GPR158Q5T848 1215 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 ARHGAP17Q68EM7 881 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 ZSCAN18Q8TBC5 510 aaPredicted RBP24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 EDAQ92838 391 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms