RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 USP19O94966 1318 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 FRMPD2Q68DX3 1309 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-205ENST00000535375 LRRC3CA6NJW4 275 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 ISM1B1AKI9 464 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 QSOX1O00391 747 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 TBX3O15119 743 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 ZKSCAN1P17029 563 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-205ENST00000535375 MRPS21P82921 87 aaKnown RBP6.29□□□□□ -1.4
PRKDC-205ENST00000535375 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 PLA1AQ53H76 456 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 APOA5Q6Q788 366 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 GAS2L3Q86XJ1 694 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 FMNL3Q8IVF7 1028 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 LRRC71Q8N4P6 559 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 FAM156AQ8NDB6 213 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 LRTOMTQ8WZ04 291 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 SARAFQ96BY9 339 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 DPH1Q9BZG8 443 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 PRDM11Q9NQV5 511 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 CPNE7Q9UBL6 633 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 DDX20Q9UHI6 824 aaKnown RBP6.29□□□□□ -1.4
PRKDC-205ENST00000535375 OGDHLQ9ULD0 1010 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 PADI4Q9UM07 663 aa6.29□□□□□ -1.4
PRKDC-205ENST00000535375 A1L4Q6 167 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 MYO1FO00160 1098 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 GOLIM4O00461 696 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 FRS3O43559 492 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 MAP4K4O95819 1239 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-205ENST00000535375 FESP07332 822 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 IL6RP08887 468 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-205ENST00000535375 CYP2C18P33260 490 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 PDE6CP51160 858 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 CLCN2P51788 898 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 DGKEP52429 567 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 GRM3Q14832 879 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 CNGA2Q16280 664 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 DEPDC1Q5TB30 811 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 SWSAP1Q6NVH7 229 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 MAVSQ7Z434 540 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 WDR53Q7Z5U6 358 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-205ENST00000535375 AMIGO2Q86SJ2 522 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 TTC8Q8TAM2 541 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 OSCP1Q8WVF1 389 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 XAGE5Q8WWM1 108 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 GLG1Q92896 1179 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 PPP2R3CQ969Q6 453 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 LRRC27Q9C0I9 530 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 ZNF287Q9HBT7 754 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 TRMT13Q9NUP7 481 aaKnown RBP6.28□□□□□ -1.4
PRKDC-205ENST00000535375 AFF4Q9UHB7 1163 aaKnown RBP6.28□□□□□ -1.4
PRKDC-205ENST00000535375 SH2B3Q9UQQ2 575 aa6.28□□□□□ -1.4
PRKDC-205ENST00000535375 A6NNZ2 444 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 TMEM233B4DJY2 109 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 C1QL1O75973 258 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 ZBED1O96006 694 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 HNRNPCP07910 306 aaKnown RBP eCLIP6.27□□□□□ -1.41
PRKDC-205ENST00000535375 LIPAP38571 399 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 FAM193AP78312 1265 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 SP2Q02086 613 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 DCAF12L1Q5VU92 463 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 ANKRD16Q6P6B7 361 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 SLC29A4Q7RTT9 530 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 SPARTQ8N0X7 666 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 FANCBQ8NB91 859 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 R3HDM4Q96D70 268 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 CXorf36Q9H7Y0 433 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 SMURF2Q9HAU4 748 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 OBP2AQ9NY56 170 aa6.27□□□□□ -1.41
PRKDC-205ENST00000535375 TPP1O14773 563 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 RASSF9O75901 435 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 HRGP04196 525 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 DRD4P21917 467 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 FBLP22087 321 aaKnown RBP6.26□□□□□ -1.41
PRKDC-205ENST00000535375 NHLH1Q02575 133 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 GBX1Q14549 363 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 POLD3Q15054 466 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-205ENST00000535375 CCDC142Q17RM4 750 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 INSCQ1MX18 579 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 SUMO4Q6EEV6 95 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 CHST15Q7LFX5 561 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-205ENST00000535375 ZNF804AQ7Z570 1209 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 BPIFB1Q8TDL5 484 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 SPSB4Q96A44 273 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 PPP1R9BQ96SB3 815 aa6.26□□□□□ -1.41
PRKDC-205ENST00000535375 DPCDQ9BVM2 203 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-205ENST00000535375 ADARB2Q9NS39 739 aaKnown RBP6.26□□□□□ -1.41
PRKDC-205ENST00000535375 TRIM43BA6NCK2 446 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 PYCARD-AS1I3L0S3 204 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 RGS10O43665 173 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 DLDP09622 509 aaKnown RBP6.25□□□□□ -1.41
PRKDC-205ENST00000535375 MYF5P13349 255 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 JUPP14923 745 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 KCNA3P22001 575 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 ITPKBP27987 946 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 PRKAR1BP31321 381 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 ATXN1P54253 815 aaKnown RBP6.25□□□□□ -1.41
PRKDC-205ENST00000535375 TPTEP56180 551 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 EEFSECP57772 596 aaKnown RBP6.25□□□□□ -1.41
PRKDC-205ENST00000535375 C21orf58P58505 322 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 TBC1D25Q3MII6 688 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms