RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 COPS7BQ9H9Q2 264 aaPredicted RBP18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 KDM6BO15054 1643 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 CYTH3O43739 400 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 DGKIO75912 1065 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 CKMP06732 381 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 DARSP14868 501 aaKnown RBP18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 C11orf74Q86VG3 221 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 PNKPQ96T60 521 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 SCUBE2Q9NQ36 999 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 SCN3BQ9NY72 215 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 MSH4O15457 936 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 RAD51CO43502 376 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 LAYNQ6UX15 382 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 OPTNQ96CV9 577 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 ALKQ9UM73 1620 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 TGM2P21980 687 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 OXCT1P55809 520 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 CHI3L2Q15782 390 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 CACHD1Q5VU97 1274 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 ACSF2Q96CM8 615 aaPredicted RBP18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 CYFIP2Q96F07 1278 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 ASCC2Q9H1I8 757 aaPredicted RBP18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 MPP6Q9NZW5 540 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 TRIM10Q9UDY6 481 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 SETD1BQ9UPS6 1966 aaKnown RBP18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 ANXA11P50995 505 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 RPL10AP62906 217 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 SH2D3CQ8N5H7 860 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 ZNF473Q8WTR7 871 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 SGF29Q96ES7 293 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 YME1L1Q96TA2 773 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 EMILIN2Q9BXX0 1053 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 MANSC1Q9H8J5 431 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 AGPAT3Q9NRZ7 376 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 KLC4Q9NSK0 619 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 TUBE1Q9UJT0 475 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 CYB561D2O14569 222 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 CDC16Q13042 620 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 DDX39BQ13838 428 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 SEZ6Q53EL9 994 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 AGAP9Q5VTM2 703 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 GJB7Q6PEY0 223 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 ARRDC4Q8NCT1 418 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 OSBPL10Q9BXB5 764 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 RNF112Q9ULX5 631 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 GEMIN4P57678 1058 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 CAMK2GQ13555 558 aaPredicted RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 CTXN3Q4LDR2 81 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 P3H2Q8IVL5 708 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 AAR2Q9Y312 384 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 TIGD7Q6NT04 549 aaPredicted RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 SLC16A10Q8TF71 515 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 XPO6Q96QU8 1125 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 ECSITQ9BQ95 431 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 TRPM5Q9NZQ8 1165 aa18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.85■□□□□ 0.61
SFSWAP-203ENST00000535236 ZC3H11AO75152 810 aaKnown RBP eCLIP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 COILP38432 576 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 KLK7P49862 253 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 DENND5BQ6ZUT9 1274 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 COPG1Q9Y678 874 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 CAND2O75155 1236 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 CAP2P40123 477 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 KCNJ1P48048 391 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 ANTXR2P58335 489 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 MPZL3Q6UWV2 235 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 PCSK9Q8NBP7 692 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 OR2W6PQ8NHA6 318 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 RIN2Q8WYP3 895 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 KCTD10Q9H3F6 313 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 RAD18Q9NS91 495 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 V9GYQ6 96 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 GLI2P10070 1586 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 VPS26AO75436 327 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 F9P00740 461 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 VDRP11473 427 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 STIP1P31948 543 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 SLC16A1P53985 500 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 ACOT1Q86TX2 421 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 PRPF39Q86UA1 669 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 ERP27Q96DN0 273 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 TMEM120BA0PK00 339 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 PHF20L1A8MW92 1017 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 RFX3P48380 749 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 GCLCP48506 637 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 CCDC142Q17RM4 750 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 ZNF284Q2VY69 593 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 SYN2Q92777 582 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 ERP44Q9BS26 406 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 MROH8Q9H579 483 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 VIPAS39Q9H9C1 493 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 ZDHHC9Q9Y397 364 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 CNTNAP4Q9C0A0 1308 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 DYRK3O43781 588 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 MRPS15P82914 257 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 NAA30Q147X3 362 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 ANKS6Q68DC2 871 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 ADGRF2Q8IZF7 708 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 TMEM245Q9H330 911 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 SMARCAL1Q9NZC9 954 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms