RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
TMEM258-202ENST00000535042 PIDD1Q9HB75 910 aa13.94□□□□□ -0.18
TMEM258-202ENST00000535042 IFNKQ9P0W0 207 aa13.94□□□□□ -0.18
TMEM258-202ENST00000535042 REV3LO60673 3130 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 F8VP50 259 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 AP5Z1O43299 807 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 XYLBO75191 536 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 PAEPP09466 180 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 VDRP11473 427 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 CD19P15391 556 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 GRIK1P39086 918 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 PBX1P40424 430 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 USP8P40818 1118 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 EPHB3P54753 998 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 POLR2FP61218 127 aaKnown RBP13.93□□□□□ -0.18
TMEM258-202ENST00000535042 RPL10AP62906 217 aaKnown RBP13.93□□□□□ -0.18
TMEM258-202ENST00000535042 PLD1Q13393 1074 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 MTMR3Q13615 1198 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 RAPGEF1Q13905 1077 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 CBX2Q14781 532 aaPredicted RBP13.93□□□□□ -0.18
TMEM258-202ENST00000535042 DNAJB7Q7Z6W7 309 aaPredicted RBP13.93□□□□□ -0.18
TMEM258-202ENST00000535042 ATXN2LQ8WWM7 1075 aaKnown RBP13.93□□□□□ -0.18
TMEM258-202ENST00000535042 C8orf48Q96LL4 319 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 ZNF512Q96ME7 567 aaPredicted RBP13.93□□□□□ -0.18
TMEM258-202ENST00000535042 CORO1BQ9BR76 489 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 STK33Q9BYT3 514 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 ZNF334Q9HCZ1 680 aaPredicted RBP13.93□□□□□ -0.18
TMEM258-202ENST00000535042 NLRC4Q9NPP4 1024 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 KRT82Q9NSB4 513 aa13.93□□□□□ -0.18
TMEM258-202ENST00000535042 MTCL1Q9Y4B5 1905 aaKnown RBP13.92□□□□□ -0.18
TMEM258-202ENST00000535042 A0A1W2PQC6 194 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 SLC38A8A6NNN8 435 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 O00370 1275 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 CYP26A1O43174 497 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 AP1G2O75843 785 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 RHOP08100 348 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 BMP1P13497 986 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 HMGA1P17096 107 aaKnown RBP13.92□□□□□ -0.18
TMEM258-202ENST00000535042 PTPN2P17706 415 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 BRD2P25440 801 aaKnown RBP13.92□□□□□ -0.18
TMEM258-202ENST00000535042 SSTR3P32745 418 aaPredicted RBP13.92□□□□□ -0.18
TMEM258-202ENST00000535042 CCR2P41597 374 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 MTHFRP42898 656 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 MRPS5P82675 430 aaKnown RBP13.92□□□□□ -0.18
TMEM258-202ENST00000535042 SMAD2Q15796 467 aaKnown RBP13.92□□□□□ -0.18
TMEM258-202ENST00000535042 SGO2Q562F6 1265 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 TTC30AQ86WT1 665 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 TMC8Q8IU68 726 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 FAM71AQ8IYT1 594 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 NEK11Q8NG66 645 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 PSMG2Q969U7 264 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 SMARCD1Q96GM5 515 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 RIPOR3Q96MK2 946 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 ASB2Q96Q27 587 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 XPO4Q9C0E2 1151 aaKnown RBP13.92□□□□□ -0.18
TMEM258-202ENST00000535042 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
TMEM258-202ENST00000535042 KIAA1257Q9ULG3 409 aa13.92□□□□□ -0.18
TMEM258-202ENST00000535042 ATP8B3O60423 1300 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 F8VZ95 297 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 MOSPD3O75425 235 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 SLC34A2O95436 690 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 FAM200BP0CF97 657 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 TRIM21P19474 475 aaKnown RBP13.91□□□□□ -0.18
TMEM258-202ENST00000535042 RFX1P22670 979 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 CLCN1P35523 988 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 EPHA5P54756 1037 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 MAP3K7CLP57077 242 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 JAM2P57087 298 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 USP46P62068 366 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 VEPH1Q14D04 833 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 AAK1Q2M2I8 961 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 SLC5A9Q2M3M2 681 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 GOLGA7BQ2TAP0 167 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 PUS10Q3MIT2 529 aaKnown RBP13.91□□□□□ -0.18
TMEM258-202ENST00000535042 POTEHQ6S545 545 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 CLEC20AQ6ZU45 233 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 GPIHBP1Q8IV16 184 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.91□□□□□ -0.18
TMEM258-202ENST00000535042 ITFG1Q8TB96 612 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 TCEAL4Q96EI5 215 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 SPATA17Q96L03 361 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 NECTIN4Q96NY8 510 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 DUSP16Q9BY84 665 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 DNAI2Q9GZS0 605 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 IL21Q9HBE4 155 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 DMAP1Q9NPF5 467 aaPredicted RBP13.91□□□□□ -0.18
TMEM258-202ENST00000535042 TSPAN16Q9UKR8 245 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 ASB3Q9Y575 518 aa13.91□□□□□ -0.18
TMEM258-202ENST00000535042 CLUHO75153 1309 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 HHLA1C9JL84 531 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 TULP2O00295 520 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 TNFRSF10BO14763 440 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 TRIM66O15016 1216 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 MICAL2O94851 1124 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 CFHP08603 1231 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 MYL4P12829 197 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 GJA1P17302 382 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 NPR3P17342 541 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 ANXA13P27216 316 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms