RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CBWD2Q8IUF1 395 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 HSCBQ8IWL3 235 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 TMEM86AQ8N2M4 240 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 TOP6BLQ8N6T0 577 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 OR5B17Q8NGF7 314 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 TTC8Q8TAM2 541 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 SCFD1Q8WVM8 642 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 SEPT5Q99719 369 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 MTMR12Q9C0I1 747 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 ATXN3LQ9H3M9 355 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 SLITRK6Q9H5Y7 841 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 C8orf33Q9H7E9 229 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 HSPBP1Q9NZL4 362 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 RCOR1Q9UKL0 485 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 AKAP13Q12802 2813 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 GCN1Q92616 2671 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 PVALEFA0A1B0GWK0 134 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 ZNF233A6NK53 670 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 SPECC1L-ADORA2AF8WAN1 911 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 CEACAM1P13688 526 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 CASP1P29466 404 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 CDC25CP30307 473 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 CTHP32929 405 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 CDR1P51861 262 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 SNRPFP62306 86 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 ASIC1P78348 528 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 CREB5Q02930 508 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 PON2Q15165 354 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 SURF1Q15526 300 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 NFE2Q16621 373 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 BMT2Q1RMZ1 405 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 SOWAHAQ2M3V2 549 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 INTS6LQ5JSJ4 861 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 FAM26FQ5R3K3 315 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 GPR158Q5T848 1215 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 FOXD4L5Q5VV16 416 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 LMBRD2Q68DH5 695 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 FAM171BQ6P995 826 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 GIPC2Q8TF65 315 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 FOXD4L4Q8WXT5 416 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 ANKRD36BP1Q96IX9 119 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 SLC46A2Q9BY10 475 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 GZF1Q9H116 711 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 TASP1Q9H6P5 420 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 KIAA1586Q9HCI6 787 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 ABCB6Q9NP58 842 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 IGSF5Q9NSI5 407 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 DDX43Q9NXZ2 648 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 PCDHB5Q9Y5E4 795 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 FLNBO75369 2602 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 UBE4BO95155 1302 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 ADAMTS20P59510 1910 aa10.8□□□□□ -0.68
CLSTN3-203ENST00000534830 MYBPHLA2RUH7 354 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 KLRC4O43908 158 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 HUS1O60921 280 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 PRAMEF12O95522 483 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 CAVIN2O95810 425 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 CST3P01034 146 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 TMEM191BP0C7N4 346 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 LHX1P48742 406 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 GPR15P49685 360 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 NLRP12P59046 1061 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 CYP4F8P98187 520 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 MYL7Q01449 175 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 TSPY1Q01534 308 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 DNM1Q05193 864 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 BFSP1Q12934 665 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 CUL4BQ13620 913 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 VEPH1Q14D04 833 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 ELF2Q15723 593 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 DUOXA2Q1HG44 320 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 CFAP221Q4G0U5 840 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 SOWAHCQ53LP3 525 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 ARHGAP15Q53QZ3 475 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 RALGPS2Q86X27 583 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 GPIHBP1Q8IV16 184 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 WDR49Q8IV35 697 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 C12orf56Q8IXR9 622 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 TMEM174Q8WUU8 243 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 KBTBD7Q8WVZ9 684 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 ZC3H10Q96K80 434 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 MYRFLQ96LU7 910 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 PI4K2AQ9BTU6 479 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 AGPAT3Q9NRZ7 376 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 ABI2Q9NYB9 513 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 ZMYM5Q9UJ78 669 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 CFAP45Q9UL16 551 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 SLC8A2Q9UPR5 921 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 SNX9Q9Y5X1 595 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 EML5Q05BV3 1969 aa10.79□□□□□ -0.68
CLSTN3-203ENST00000534830 HELZP42694 1942 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 LOC400499M0QZD8 3231 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CCDC163A0A0D9SF12 145 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 LNP1A1A4G5 178 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CLIC2O15247 247 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 HCRTO43612 131 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 ACTN4O43707 911 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 HYAL3O43820 417 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 PRPF40AO75400 957 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 TADA3O75528 432 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms