RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 SCN1AP35498 2009 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 GOLGA6L22H0YM25 854 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 GABRDO14764 452 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 AXIN1O15169 862 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 HUS1O60921 280 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 PRPF40AO75400 957 aaKnown RBP12.39□□□□□ -0.43
CTNND1-238ENST00000534647 PTMSP20962 102 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 GARTP22102 1010 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 LHX1P48742 406 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 SHC2P98077 582 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 FAM160A1Q05DH4 1040 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
CTNND1-238ENST00000534647 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
CTNND1-238ENST00000534647 L1TD1Q5T7N2 865 aaKnown RBP12.39□□□□□ -0.43
CTNND1-238ENST00000534647 TRIM68Q6AZZ1 485 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 IL31Q6EBC2 164 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 SYT13Q7L8C5 426 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 DPH6Q7L8W6 267 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 LIMS2Q7Z4I7 341 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 KBTBD6Q86V97 674 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 SFR1Q86XK3 245 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 BRSK2Q8IWQ3 736 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 KIAA1958Q8N8K9 716 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 C1orf127Q8N9H9 656 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 RASSF8Q8NHQ8 419 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 CCDC26Q8TAB7 109 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 RIN3Q8TB24 985 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 OSCP1Q8WVF1 389 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 FUBP3Q96I24 572 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTNND1-238ENST00000534647 CEP295NLQ96MC4 621 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 ACCSQ96QU6 501 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 PI4K2AQ9BTU6 479 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 ECT2Q9H8V3 914 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 OLFML3Q9NRN5 406 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 VPS45Q9NRW7 570 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
CTNND1-238ENST00000534647 RNF40O75150 1001 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 TADA3O75528 432 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 EGFP01133 1207 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 USP17L7P0C7H9 530 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 CCDC192P0DO97 292 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 ARSAP15289 507 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 PFKLP17858 780 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 CYP2F1P24903 491 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 PMLP29590 882 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 POLR2BP30876 1174 aaKnown RBP12.38□□□□□ -0.43
CTNND1-238ENST00000534647 GJA4P35212 333 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 MAGEA11P43364 429 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 MARSP56192 900 aaKnown RBP12.38□□□□□ -0.43
CTNND1-238ENST00000534647 WNT7BP56706 349 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 MYL7Q01449 175 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 ALCAMQ13740 583 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 MTF1Q14872 753 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 SF3A2Q15428 464 aaKnown RBP12.38□□□□□ -0.43
CTNND1-238ENST00000534647 ZNF77Q15935 545 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 DDR2Q16832 855 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 ST3GAL2Q16842 350 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 PLK5Q496M5 336 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 AASDHQ4L235 1098 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-238ENST00000534647 C6orf132Q5T0Z8 1188 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 FAM171BQ6P995 826 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 CPA6Q8N4T0 437 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 TOP6BLQ8N6T0 577 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 C12orf50Q8NA57 414 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-238ENST00000534647 EPSTI1Q96J88 318 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 IKZF4Q9H2S9 585 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 MRPL44Q9H9J2 332 aaKnown RBP12.38□□□□□ -0.43
CTNND1-238ENST00000534647 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
CTNND1-238ENST00000534647 GCNT4Q9P109 453 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 CCDC39Q9UFE4 941 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 AGAP1Q9UPQ3 857 aa12.38□□□□□ -0.43
CTNND1-238ENST00000534647 MORC2Q9Y6X9 1032 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-238ENST00000534647 FRMD3A2A2Y4 597 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 KIAA0391O15091 583 aaKnown RBP12.37□□□□□ -0.43
CTNND1-238ENST00000534647 ITGB3P05106 788 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 PCSK1P29120 753 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 PXNP49023 591 aaPredicted RBP12.37□□□□□ -0.43
CTNND1-238ENST00000534647 GPR15P49685 360 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 CDR1P51861 262 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 RBP5P82980 135 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 TFAMQ00059 246 aaKnown RBP12.37□□□□□ -0.43
CTNND1-238ENST00000534647 USP4Q13107 963 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 NR1H3Q13133 447 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 STPG1Q5TH74 334 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 USP49Q70CQ1 688 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 DYMQ7RTS9 669 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 FSIP1Q8NA03 581 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
CTNND1-238ENST00000534647 CD101Q93033 1021 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 ATP2A3Q93084 1043 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 SPATA17Q96L03 361 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 CYP2S1Q96SQ9 504 aa12.37□□□□□ -0.43
CTNND1-238ENST00000534647 LSM14BQ9BX40 385 aaKnown RBP12.37□□□□□ -0.43
CTNND1-238ENST00000534647 DUSP15Q9H1R2 295 aaPredicted RBP12.37□□□□□ -0.43
CTNND1-238ENST00000534647 RXFP3Q9NSD7 469 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms