RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-213ENST00000534532 ORC1Q13415 861 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 RETSATQ6NUM9 610 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 CSGALNACT1Q8TDX6 532 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 ERGIC2Q96RQ1 377 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 ATXN3LQ9H3M9 355 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 ASB7Q9H672 318 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 YY1AP1Q9H869 796 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 FAF1Q9UNN5 650 aaPredicted RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 SMG5Q9UPR3 1016 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 DDHD2O94830 711 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 KRT4P19013 534 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 FGFR4P22455 802 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 CNTN2Q02246 1040 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 CES5AQ6NT32 575 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 HIBCHQ6NVY1 386 aaPredicted RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 EFL1Q7Z2Z2 1120 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 TAGAPQ8N103 731 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 RUBCNQ92622 972 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 ZNF669Q96BR6 464 aaPredicted RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 A1CFQ9NQ94 594 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 DDX4Q9NQI0 724 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 TAF6LQ9Y6J9 622 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 RNF103-CHMP3A0A140T963 221 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 ZSCAN9O15535 394 aaPredicted RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 MAPTP10636 758 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 ING2Q9H160 280 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 SUFUQ9UMX1 484 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 MZF1P28698 734 aaPredicted RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 WEE1P30291 646 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 C6orf10Q5SRN2 563 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 CATSPERGQ6ZRH7 1159 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 NAF1Q96HR8 494 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 MFSD1Q9H3U5 465 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 IGFLR1Q9H665 355 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 SLC39A10Q9ULF5 831 aa16.36■□□□□ 0.21
NCAPD3-213ENST00000534532 MEFVO15553 781 aaPredicted RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 TRIM65Q6PJ69 517 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 PIP4K2CQ8TBX8 421 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 FRMD8P1Q9BZ68 369 aaPredicted RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 TRMT6Q9UJA5 497 aaKnown RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 CHMP2BQ9UQN3 213 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 NWD1Q149M9 1564 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 CSDE1O75534 798 aaKnown RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 TKTL1P51854 596 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 PTPN11Q06124 597 aaPredicted RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 E4F1Q66K89 784 aaPredicted RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 VPS37AQ8NEZ2 397 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 PRPF18Q99633 342 aaKnown RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 LRRIQ3A6PVS8 624 aaPredicted RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 CLASP2O75122 1294 aaKnown RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 CDH16O75309 829 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 MYL2P10916 166 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 MYL6P60660 151 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 MTF1Q14872 753 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 NT5DC4Q86YG4 428 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 OR9Q1Q8NGQ5 310 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 COG1Q8WTW3 980 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 GRAMD1AQ96CP6 724 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 KCNQ5Q9NR82 932 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 IRF6O14896 467 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 TADA3O75528 432 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 ARIH2O95376 493 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 ITGALP20701 1170 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 BEX3Q00994 111 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 CXorf38Q8TB03 319 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 PSMC3IPQ9P2W1 217 aaPredicted RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 ITSN1Q15811 1721 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 CNTNAP2Q9UHC6 1331 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 FRMD3A2A2Y4 597 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 ACKR2O00590 384 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 SOAT2O75908 522 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 TMEM259Q4ZIN3 620 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 GJB7Q6PEY0 223 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 GSPT2Q8IYD1 628 aaKnown RBP16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 RRN3Q9NYV6 651 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
NCAPD3-213ENST00000534532 SLIT1O75093 1534 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 FXR1P51114 621 aaKnown RBP eCLIP16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 HPCAP84074 193 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 C1orf146Q5VVC0 180 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 FAM71DQ8N9W8 422 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 CISHQ9NSE2 258 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 MRGBPQ9NV56 204 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 FAM32AQ9Y421 112 aaKnown RBP16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 PSTPIP1O43586 416 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 RTN3O95197 1032 aaPredicted RBP16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 LSM8O95777 96 aaKnown RBP16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 CEP19Q96LK0 163 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 NMRK1Q9NWW6 199 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 LGALS2P05162 132 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 EPB42P16452 691 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 AKAP5P24588 427 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 FAM172AQ8WUF8 416 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 SPIRE2Q8WWL2 714 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 ADAM2Q99965 735 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 RIC8BQ9NVN3 520 aa16.34■□□□□ 0.21
NCAPD3-213ENST00000534532 NFASCO94856 1347 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms