RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 MAGI1Q96QZ7 1491 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 QRICH2Q9H0J4 1663 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF536O15090 1300 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ZMYM6O95789 1325 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ZFYVE9O95405 1425 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ABCA9Q8IUA7 1624 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ADAMTS12P58397 1594 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 MED23Q9ULK4 1368 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 A0A0D9SFI3 127 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 A0A0G2JLW4 131 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PRSS38A1L453 326 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 A6NNZ2 444 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 KIF28PB7ZC32 967 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 E7EVH7 732 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 H3BQV1 296 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ORC4O43929 436 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PRAMEF4O60810 478 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SMIM24O75264 130 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF189O75820 626 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 IL33O95760 270 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 IL18BPO95998 194 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 KRT14P02533 472 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 GYPCP04921 128 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 C8AP07357 584 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 GSTA1P08263 222 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 VIMP08670 466 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PAEPP09466 180 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 NQO1P15559 274 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 POU3F3P20264 500 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 MCM3P25205 808 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 TMOD1P28289 359 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 TNFRSF8P28908 595 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 STAT6P42226 847 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PSMC4P43686 418 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 CCT4P50991 539 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 STAT5BP51692 787 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SLC16A1P53985 500 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 MANFP55145 182 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 MXRA7P84157 204 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SRSF2Q01130 221 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SAFB2Q14151 953 aaKnown RBP eCLIP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PLS1Q14651 629 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 USP10Q14694 798 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SLMAPQ14BN4 828 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PTPAQ15257 358 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PPP1R7Q15435 360 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 TRADDQ15628 312 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ZRSR2Q15696 482 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 CDC37Q16543 378 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 FSCN1Q16658 493 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF827Q17R98 1081 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SGSM1Q2NKQ1 1148 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 TUBB8Q3ZCM7 444 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 GALNTL6Q49A17 601 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 LRRC23Q53EV4 343 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SPECC1Q5M775 1068 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ANKRD20A2Q5SQ80 823 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ANKRD20A1Q5TYW2 823 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 RNF220Q5VTB9 566 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ANKRD20A3Q5VUR7 823 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 KLHDC10Q6PID8 442 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 BLOC1S2Q6QNY1 142 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SLC4A10Q6U841 1118 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 UNQ6494/PRO21346Q6UXR6 183 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ARMC9Q7Z3E5 817 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 BMP8AQ7Z5Y6 402 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF589Q86UQ0 364 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 EXOC3L1Q86VI1 746 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PALB2Q86YC2 1186 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 CMIPQ8IY22 773 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SLC15A3Q8IY34 581 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 CNTROBQ8N137 903 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 MIER2Q8N344 545 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PPM1NQ8N819 430 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 LINC01356Q8N9X3 169 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 TXNDC5Q8NBS9 432 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 C1orf131Q8NDD1 294 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ADAMTS17Q8TE56 1095 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SMCR8Q8TEV9 937 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 UCMAQ8WVF2 138 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 MAIP1Q8WWC4 291 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 RSAD2Q8WXG1 361 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 NCSTNQ92542 709 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 KIFAP3Q92845 792 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 GFM2Q969S9 779 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 FAM136AQ96C01 138 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 FUBP3Q96I24 572 aaKnown RBP eCLIP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 C8orf76Q96K31 380 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ATP6V1G3Q96LB4 118 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC43Q96MW1 224 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 WDR92Q96MX6 357 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 RPS6KC1Q96S38 1066 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 CHP1Q99653 195 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 LLPHQ9BRT6 129 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ADI1Q9BV57 179 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ACE2Q9BYF1 805 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 LRRC2Q9BYS8 371 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 KCTD10Q9H3F6 313 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SEMA4AQ9H3S1 761 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms