RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 ITPRIPL2Q3MIP1 535 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 SDHAF4Q5VUM1 108 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 TXNDC8Q6A555 127 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 SCN4BQ8IWT1 228 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 SPEM1Q8N4L4 309 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 USP13Q92995 863 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-228ENST00000534373 XYLT2Q9H1B5 865 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 KCTD10Q9H3F6 313 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 CRTAC1Q9NQ79 661 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 GKN1Q9NS71 199 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 GTSE1Q9NYZ3 720 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 PATJQ8NI35 1801 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 IKBKBO14920 756 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 HCRTO43612 131 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 LILRB5O75023 590 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 C4BPAP04003 597 aaKnown RBP14.3□□□□□ -0.12
CAPN1-228ENST00000534373 RPN1P04843 607 aaKnown RBP14.3□□□□□ -0.12
CAPN1-228ENST00000534373 USP17L7P0C7H9 530 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 PTPN1P18031 435 aaKnown RBP14.3□□□□□ -0.12
CAPN1-228ENST00000534373 ANXA13P27216 316 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 GRIK1P39086 918 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 CXCL12P48061 93 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 MYL6P60660 151 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 FAM160A1Q05DH4 1040 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 RUNX3Q13761 415 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 PDGFRLQ15198 375 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 CC2D1AQ6P1N0 951 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-228ENST00000534373 DENND5BQ6ZUT9 1274 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 SUMF1Q8NBK3 374 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 RUBCNQ92622 972 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 MYLPFQ96A32 169 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 CCDC34Q96HJ3 373 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 PCED1BQ96HM7 432 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 ZFYVE19Q96K21 471 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 C8orf48Q96LL4 319 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 MRPL45Q9BRJ2 306 aaKnown RBP14.3□□□□□ -0.12
CAPN1-228ENST00000534373 TRAF3IP3Q9Y228 551 aa14.3□□□□□ -0.12
CAPN1-228ENST00000534373 DENND4CQ5VZ89 1909 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 TRAV19A0A0A6YYK7 116 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 MAPK13O15264 365 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 CALUO43852 315 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-228ENST00000534373 TADA3O75528 432 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 RHOBTB3O94955 611 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 PAPSS2O95340 614 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-228ENST00000534373 TCF3P15923 654 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 BDNFP23560 247 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 SOX9P48436 509 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 NDUFA8P51970 172 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 PSMC1P62191 440 aaKnown RBP14.29□□□□□ -0.12
CAPN1-228ENST00000534373 NOP14P78316 857 aaKnown RBP14.29□□□□□ -0.12
CAPN1-228ENST00000534373 NFIL3Q16649 462 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 KIAA1958Q8N8K9 716 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 TMC2Q8TDI7 906 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 TAF4BQ92750 862 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 EXOC4Q96A65 974 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 TTLL2Q9BWV7 592 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 ELOVL4Q9GZR5 314 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 SMG9Q9H0W8 520 aaKnown RBP14.29□□□□□ -0.12
CAPN1-228ENST00000534373 NXF1Q9UBU9 619 aaKnown RBP14.29□□□□□ -0.12
CAPN1-228ENST00000534373 CCL26Q9Y258 94 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 FRMD4BQ9Y2L6 1034 aa14.29□□□□□ -0.12
CAPN1-228ENST00000534373 LRRIQ3A6PVS8 624 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-228ENST00000534373 A8MXQ7 604 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 NR3C1P04150 777 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 TDGF1P13385 188 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 P4HA1P13674 534 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 CASP4P49662 377 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 ENPEPQ07075 957 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 TNK2Q07912 1038 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 BIRC3Q13489 604 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 NCOA4Q13772 614 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 CCINQ13939 588 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 KCNB1Q14721 858 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 CCDC142Q17RM4 750 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 SGSM1Q2NKQ1 1148 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 ZNF667Q5HYK9 610 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 MDH1BQ5I0G3 518 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 TDRD10Q5VZ19 366 aaKnown RBP14.28□□□□□ -0.12
CAPN1-228ENST00000534373 TXNDC11Q6PKC3 985 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 PLEKHO2Q8TD55 490 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 EPC1Q9H2F5 836 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 TRPM5Q9NZQ8 1165 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 GCNT4Q9P109 453 aa14.28□□□□□ -0.12
CAPN1-228ENST00000534373 TRDMT1O14717 391 aaKnown RBP14.27□□□□□ -0.13
CAPN1-228ENST00000534373 CKMP06732 381 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 HDCP19113 662 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 HOXA6P31267 233 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 DPYDQ12882 1025 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 GAS6Q14393 721 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 MTF1Q14872 753 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 PON2Q15165 354 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 ZNF699Q32M78 642 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 ZACNQ401N2 412 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 TSSK4Q6SA08 328 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.13
CAPN1-228ENST00000534373 GPR161Q8N6U8 529 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms