RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 SEMA4DQ92854 862 aa16.84■□□□□ 0.29
TSKU-204ENST00000533752 ELMO3Q96BJ8 720 aa16.84■□□□□ 0.29
TSKU-204ENST00000533752 SMARCD1Q96GM5 515 aa16.84■□□□□ 0.29
TSKU-204ENST00000533752 MED10Q9BTT4 135 aa16.84■□□□□ 0.29
TSKU-204ENST00000533752 SRRTQ9BXP5 876 aaKnown RBP16.84■□□□□ 0.29
TSKU-204ENST00000533752 ZNF518BQ9C0D4 1074 aa16.84■□□□□ 0.29
TSKU-204ENST00000533752 TASP1Q9H6P5 420 aa16.84■□□□□ 0.29
TSKU-204ENST00000533752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.84■□□□□ 0.295e-13■■■■■ 382
TSKU-204ENST00000533752 WNT16Q9UBV4 365 aa16.84■□□□□ 0.29
TSKU-204ENST00000533752 MAGED2Q9UNF1 606 aaPredicted RBP16.84■□□□□ 0.29
TSKU-204ENST00000533752 NARSO43776 548 aaKnown RBP16.83■□□□□ 0.28
TSKU-204ENST00000533752 CILPO75339 1184 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 FCARP24071 287 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 CT47A1Q5JQC4 288 aaPredicted RBP16.83■□□□□ 0.28
TSKU-204ENST00000533752 SDHAF4Q5VUM1 108 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 DENND5BQ6ZUT9 1274 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 ACOT1Q86TX2 421 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 FAM35AQ86V20 835 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 TRIM59Q8IWR1 403 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 FBXL6Q8N531 539 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 ZSWIM3Q96MP5 696 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 B3GNT5Q9BYG0 378 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 MFSD1Q9H3U5 465 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 DMAP1Q9NPF5 467 aaPredicted RBP16.83■□□□□ 0.28
TSKU-204ENST00000533752 HCN4Q9Y3Q4 1203 aa16.83■□□□□ 0.28
TSKU-204ENST00000533752 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.83■□□□□ 0.28
TSKU-204ENST00000533752 PTPRDP23468 1912 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 F8VP50 259 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 NRG2O14511 850 aaPredicted RBP16.82■□□□□ 0.28
TSKU-204ENST00000533752 F11P03951 625 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 CD58P19256 250 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 TBXAS1P24557 533 aaPredicted RBP16.82■□□□□ 0.28
TSKU-204ENST00000533752 ERCC5P28715 1186 aaPredicted RBP16.82■□□□□ 0.28
TSKU-204ENST00000533752 CYP4F8P98187 520 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 TPD52L1Q16890 204 aaPredicted RBP16.82■□□□□ 0.28
TSKU-204ENST00000533752 TANGO2Q6ICL3 276 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 FAM114A1Q8IWE2 563 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 GPT2Q8TD30 523 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 RPP25Q9BUL9 199 aaKnown RBP16.82■□□□□ 0.28
TSKU-204ENST00000533752 TTLL2Q9BWV7 592 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 KRT82Q9NSB4 513 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 OBP2AQ9NY56 170 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 HMGXB4Q9UGU5 601 aa16.82■□□□□ 0.28
TSKU-204ENST00000533752 CLDN5O00501 218 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 DPYSL4O14531 572 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 RTN3O95197 1032 aaPredicted RBP16.81■□□□□ 0.28
TSKU-204ENST00000533752 AFPP02771 609 aaKnown RBP16.81■□□□□ 0.28
TSKU-204ENST00000533752 CFHP08603 1231 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 PSMC3P17980 439 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 PPP3CCP48454 512 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 PDE6CP51160 858 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 CUL2Q13617 745 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 DPCR1Q3MIW9 517 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 STXBP5Q5T5C0 1151 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 POTEHQ6S545 545 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 ARID3BQ8IVW6 561 aaPredicted RBP16.81■□□□□ 0.28
TSKU-204ENST00000533752 FUKQ8N0W3 1084 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 SIX5Q8N196 739 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 ST13P5Q8NFI4 369 aaPredicted RBP16.81■□□□□ 0.28
TSKU-204ENST00000533752 SLC2A14Q8TDB8 520 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 DNASE1L2Q92874 299 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 CNOT6LQ96LI5 555 aaKnown RBP16.81■□□□□ 0.28
TSKU-204ENST00000533752 TRMT61BQ9BVS5 477 aaKnown RBP16.81■□□□□ 0.28
TSKU-204ENST00000533752 ARHGEF3Q9NR81 526 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 CISHQ9NSE2 258 aa16.81■□□□□ 0.28
TSKU-204ENST00000533752 HEPACAM2A8MVW5 462 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 AP1G2O75843 785 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 FAM200BP0CF97 657 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 CCDC130P13994 396 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 PFKLP17858 780 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 RFX1P22670 979 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 AVPR1AP37288 418 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 GPC5P78333 572 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 KCNH2Q12809 1159 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 VITQ6UXI7 678 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 RBM43Q6ZSC3 357 aaKnown RBP16.8■□□□□ 0.28
TSKU-204ENST00000533752 MON1AQ86VX9 555 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 MFSD6LQ8IWD5 586 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 YAF2Q8IY57 180 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 CMTM8Q8IZV2 173 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 NUP93Q8N1F7 819 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 STKLD1Q8NE28 680 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 IRF7Q92985 503 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 SHDQ96IW2 340 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 NT5C1BQ96P26 610 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 SLITRK1Q96PX8 696 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 HNRNPABQ99729 332 aaKnown RBP16.8■□□□□ 0.28
TSKU-204ENST00000533752 THAP9Q9H5L6 903 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 KIF9Q9HAQ2 790 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 FAM49BQ9NUQ9 324 aa16.8■□□□□ 0.28
TSKU-204ENST00000533752 LRRN2O75325 713 aa16.79■□□□□ 0.28
TSKU-204ENST00000533752 TADA3O75528 432 aa16.79■□□□□ 0.28
TSKU-204ENST00000533752 ORC1Q13415 861 aa16.79■□□□□ 0.28
TSKU-204ENST00000533752 CELF5Q8N6W0 485 aaKnown RBP16.79■□□□□ 0.28
TSKU-204ENST00000533752 C12orf29Q8N999 325 aa16.79■□□□□ 0.28
TSKU-204ENST00000533752 PDZD8Q8NEN9 1154 aa16.79■□□□□ 0.28
TSKU-204ENST00000533752 WHAMMQ8TF30 809 aa16.79■□□□□ 0.28
TSKU-204ENST00000533752 OVCA2Q8WZ82 227 aa16.79■□□□□ 0.28
TSKU-204ENST00000533752 TWNKQ96RR1 684 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms