RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ESRRBO95718 433 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 THPOP40225 353 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 GCLCP48506 637 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-205ENST00000533464 LRRC8EQ6NSJ5 796 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 USP18Q9UMW8 372 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 PPP2R3BQ9Y5P8 575 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 NDUFS3O75489 264 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 AARSP49588 968 aaKnown RBP eCLIP18.27■□□□□ 0.524e-41■■■□□ 15
PHRF1-205ENST00000533464 CXorf38Q8TB03 319 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 RNF217Q8TC41 542 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 FAM111AQ96PZ2 611 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 OSBPL1AQ9BXW6 950 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 FRMD8P1Q9BZ68 369 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-205ENST00000533464 TISP43B9A030 160 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 KBTBD13C9JR72 458 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 ARHGDIAP52565 204 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 CNTN2Q02246 1040 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 CHI3L2Q15782 390 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 FKBP1CQ5VVH2 108 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 AP1ARQ63HQ0 302 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 C1orf186Q6ZWK4 172 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 CHSY1Q86X52 802 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 ING2Q9H160 280 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 SLC13A4Q9UKG4 626 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 SLC39A10Q9ULF5 831 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 RPS6KL1Q9Y6S9 549 aa18.27■□□□□ 0.52
PHRF1-205ENST00000533464 ZNF263O14978 683 aa18.27■□□□□ 0.51
PHRF1-205ENST00000533464 DDNO94850 711 aaPredicted RBP18.27■□□□□ 0.51
PHRF1-205ENST00000533464 GCNT1Q02742 428 aa18.27■□□□□ 0.51
PHRF1-205ENST00000533464 PDK2Q15119 407 aa18.27■□□□□ 0.51
PHRF1-205ENST00000533464 SZRD1Q7Z422 152 aa18.27■□□□□ 0.51
PHRF1-205ENST00000533464 ACTL9Q8TC94 416 aa18.27■□□□□ 0.51
PHRF1-205ENST00000533464 RXFP2Q8WXD0 754 aa18.27■□□□□ 0.51
PHRF1-205ENST00000533464 CAVIN3Q969G5 261 aa18.27■□□□□ 0.51
PHRF1-205ENST00000533464 RAB21Q9UL25 225 aa18.27■□□□□ 0.51
PHRF1-205ENST00000533464 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 TTC23LQ6PF05 361 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 FAM131BQ86XD5 332 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 ARID3BQ8IVW6 561 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 TSPYL2Q9H2G4 693 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 SEMA4AQ9H3S1 761 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 CYP3A43Q9HB55 503 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 PCDHAC2Q9Y5I4 1007 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 B2RBV5 119 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 PMPCBO75439 489 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 YY1P25490 414 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 FAM117BQ6P1L5 589 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 DENND5BQ6ZUT9 1274 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 ICA1LQ8NDH6 482 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 GLT1D1Q96MS3 346 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 PRDM5Q9NQX1 630 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 FER1L4A9Z1Z3 1794 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 CYB561D2O14569 222 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 TRADDQ15628 312 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 DNAL1Q4LDG9 190 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 OPTNQ96CV9 577 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 L3MBTL3Q96JM7 780 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 TSC22D3Q99576 134 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 OSMRQ99650 979 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 PJA2O43164 708 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 ZNF286BP0CG31 522 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 ETFBP38117 255 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 CALML6Q8TD86 181 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 THTPAQ9BU02 230 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 A1CFQ9NQ94 594 aaKnown RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 ENO3P13929 434 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 EPHX2P34913 555 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 FDFT1P37268 417 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 OAZ1P54368 228 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 BCAT1P54687 386 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 OVGP1Q12889 678 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 MAPRE1Q15691 268 aaKnown RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 C10orf120Q5SQS8 335 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
PHRF1-205ENST00000533464 NSMCE4AQ9NXX6 385 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 SLC30A1Q9Y6M5 507 aa18.26■□□□□ 0.51
PHRF1-205ENST00000533464 CYBBP04839 570 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 ODC1P11926 461 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 DNAJC19Q96DA6 116 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 ZBTB45Q96K62 511 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-205ENST00000533464 SLITRK1Q96PX8 696 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 MUC3BQ9H195 1237 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 PYGMP11217 842 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 RGS2P41220 211 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 TRAPPC12Q8WVT3 735 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 MRIQ9BWK5 157 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 LSM7Q9UK45 103 aaKnown RBP18.25■□□□□ 0.51
PHRF1-205ENST00000533464 TMEM247A6NEH6 219 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 PRRG1O14668 218 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 PFDN1O60925 122 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 LRRC55Q6ZSA7 311 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 NT5DC3Q86UY8 548 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 CREG2Q8IUH2 290 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 ADGRF2Q8IZF7 708 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 PPP1R2P1Q96PQ5 205 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-205ENST00000533464 LOC100653049A0A140TA62 436 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 WNT7AO00755 349 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 ANGPT2O15123 496 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms