RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NARSO43776 548 aaKnown RBP21.75■■□□□ 1.07
CCS-208ENST00000533244 TAF12Q16514 161 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 STXBP5Q5T5C0 1151 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 BMP8AQ7Z5Y6 402 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 FAM35AQ86V20 835 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 FUKQ8N0W3 1084 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 TTC39CQ8N584 583 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 LMO3Q8TAP4 145 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 SMARCD2Q92925 531 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 ELSPBP1Q96BH3 223 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 CNOT6LQ96LI5 555 aaKnown RBP21.75■■□□□ 1.07
CCS-208ENST00000533244 ARID3AQ99856 593 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 LRFN3Q9BTN0 628 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 ATXN3LQ9H3M9 355 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 F8VP50 259 aa21.74■■□□□ 1.07
CCS-208ENST00000533244 SRFP11831 508 aa21.74■■□□□ 1.07
CCS-208ENST00000533244 GRIK1P39086 918 aa21.74■■□□□ 1.07
CCS-208ENST00000533244 KCNH2Q12809 1159 aa21.74■■□□□ 1.07
CCS-208ENST00000533244 ORC1Q13415 861 aa21.74■■□□□ 1.07
CCS-208ENST00000533244 NT5C1AQ9BXI3 368 aa21.74■■□□□ 1.07
CCS-208ENST00000533244 CISHQ9NSE2 258 aa21.74■■□□□ 1.07
CCS-208ENST00000533244 UXTQ9UBK9 157 aaPredicted RBP21.74■■□□□ 1.07
CCS-208ENST00000533244 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.74■■□□□ 1.07
CCS-208ENST00000533244 NUP210Q8TEM1 1887 aaPredicted RBP21.74■■□□□ 1.07
CCS-208ENST00000533244 TADA3O75528 432 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 AFPP02771 609 aaKnown RBP21.73■■□□□ 1.07
CCS-208ENST00000533244 CD58P19256 250 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 WEE1P30291 646 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 CYP4F8P98187 520 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 CUL2Q13617 745 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 TANGO2Q6ICL3 276 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 ZSCAN18Q8TBC5 510 aaPredicted RBP21.73■■□□□ 1.07
CCS-208ENST00000533244 GCNAQ96QF7 691 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 KXD1Q9BQD3 176 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 TTLL2Q9BWV7 592 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 THAP9Q9H5L6 903 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 TASP1Q9H6P5 420 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 SLC2A4RGQ9NR83 387 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 MAGED2Q9UNF1 606 aaPredicted RBP21.73■■□□□ 1.07
CCS-208ENST00000533244 ATP8B3O60423 1300 aa21.73■■□□□ 1.07
CCS-208ENST00000533244 ANXA13P27216 316 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 ARHGAP15Q53QZ3 475 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 GPR158Q5T848 1215 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 DENND5BQ6ZUT9 1274 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 UBR7Q8N806 425 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 C12orf29Q8N999 325 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 SMARCD1Q96GM5 515 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 PLA2G2FQ9BZM2 168 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 ZFP14Q9HCL3 533 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 ZMYM5Q9UJ78 669 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 SOBPA7XYQ1 873 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 CCDC130P13994 396 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 USP46P62068 366 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 CETN1Q12798 172 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 CCDC183Q5T5S1 534 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 HFE2Q6ZVN8 426 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 SLC2A14Q8TDB8 520 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 HNRNPABQ99729 332 aaKnown RBP21.72■■□□□ 1.07
CCS-208ENST00000533244 SLITRK6Q9H5Y7 841 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 CSNK1G1Q9HCP0 422 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 FAM49BQ9NUQ9 324 aa21.72■■□□□ 1.07
CCS-208ENST00000533244 NCANO14594 1321 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 TRIM21P19474 475 aaKnown RBP21.71■■□□□ 1.07
CCS-208ENST00000533244 TBXAS1P24557 533 aaPredicted RBP21.71■■□□□ 1.07
CCS-208ENST00000533244 DDX6P26196 483 aaKnown RBP eCLIP21.71■■□□□ 1.07
CCS-208ENST00000533244 ZMIZ2Q8NF64 920 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 NT5C1BQ96P26 610 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 KCNK16Q96T55 309 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 MED10Q9BTT4 135 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 SLC46A2Q9BY10 475 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 DMAP1Q9NPF5 467 aaPredicted RBP21.71■■□□□ 1.07
CCS-208ENST00000533244 KRT82Q9NSB4 513 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 TMEM63CQ9P1W3 806 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 WNT16Q9UBV4 365 aa21.71■■□□□ 1.07
CCS-208ENST00000533244 TNFRSF10BO14763 440 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 RAD23BP54727 409 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 GPC5P78333 572 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 LRMPQ12912 555 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 TPD52L1Q16890 204 aaPredicted RBP21.7■■□□□ 1.06
CCS-208ENST00000533244 VITQ6UXI7 678 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 ARID3BQ8IVW6 561 aaPredicted RBP21.7■■□□□ 1.06
CCS-208ENST00000533244 SLC4A11Q8NBS3 891 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 EHBP1Q8NDI1 1231 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 E2F7Q96AV8 911 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 RSPRY1Q96DX4 576 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 CYFIP2Q96F07 1278 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 SMOQ99835 787 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 EHD2Q9NZN4 543 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 PATJQ8NI35 1801 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 ANAPC1Q9H1A4 1944 aa21.7■■□□□ 1.06
CCS-208ENST00000533244 ZNF638Q14966 1978 aaKnown RBP21.7■■□□□ 1.06
CCS-208ENST00000533244 AP1G2O75843 785 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 VIPR2P41587 438 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 ZNF394Q53GI3 561 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 MON1AQ86VX9 555 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 FAM114A1Q8IWE2 563 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 DEPDC1BQ8WUY9 529 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 MRPS31Q92665 395 aaKnown RBP21.69■■□□□ 1.06
CCS-208ENST00000533244 TMEM176AQ96HP8 235 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 DNAI2Q9GZS0 605 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms