RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 PANK4Q9NVE7 773 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 KIF26AQ9ULI4 1882 aaPredicted RBP8.82□□□□□ -1
NEDD8-207ENST00000533242 A0A1W2PQJ5 194 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 CTAGE15A4D2H0 777 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 I3L4J1 428 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 SYN3O14994 580 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 MOSPD3O75425 235 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 NOL4O94818 638 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 SEC24AO95486 1093 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 EDN1P05305 212 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 PLA2G4BP0C869 781 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 CTAGE8P0CG41 777 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 SPATA31C1P0DKV0 1188 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 HNRNPH3P31942 346 aaKnown RBP8.81□□□□□ -1
NEDD8-207ENST00000533242 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
NEDD8-207ENST00000533242 CCR2P41597 374 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 EPHA5P54756 1037 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 MAN2A1Q16706 1144 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 WHAMMP3Q1A5X7 153 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 GLRA4Q5JXX5 417 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 FAM26FQ5R3K3 315 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 HYIQ5T013 277 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 FKBP15Q5T1M5 1219 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 PAPD7Q5XG87 772 aaKnown RBP8.81□□□□□ -1
NEDD8-207ENST00000533242 RRAGAQ7L523 313 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 CTAGE6Q86UF2 777 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 MFSD6LQ8IWD5 586 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 CTAGE4Q8IX94 777 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 C3orf58Q8NDZ4 430 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 SCFD1Q8WVM8 642 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 NACC1Q96RE7 527 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 CRACR2AQ9BSW2 395 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 NUP58Q9BVL2 599 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 RAB34Q9BZG1 259 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 C8orf33Q9H7E9 229 aaPredicted RBP8.81□□□□□ -1
NEDD8-207ENST00000533242 CYP4F11Q9HBI6 524 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 K7ESF4 209 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 PMLP29590 882 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 HOXA6P31267 233 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 HOXD13P35453 343 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 EFNA5P52803 228 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 LRRC63Q05C16 580 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 DMWDQ09019 674 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 MRPL58Q14197 206 aaKnown RBP8.81□□□□□ -1
NEDD8-207ENST00000533242 GAS6Q14393 721 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
NEDD8-207ENST00000533242 XKR4Q5GH76 650 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 DGKKQ5KSL6 1271 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 HGSNATQ68CP4 663 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 IQCEQ6IPM2 695 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 ZNF662Q6ZS27 426 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 GPBP1Q86WP2 473 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 CATSPER3Q86XQ3 398 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 HS6ST3Q8IZP7 471 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 CSGALNACT1Q8TDX6 532 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 PKNOX2Q96KN3 472 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 ZNF512Q96ME7 567 aaPredicted RBP8.81□□□□□ -1
NEDD8-207ENST00000533242 ZSWIM3Q96MP5 696 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 GPR88Q9GZN0 384 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 IKZF4Q9H2S9 585 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 KCTD10Q9H3F6 313 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 GOLGA2P5Q9HBQ8 144 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 NLRC4Q9NPP4 1024 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 SLC38A7Q9NVC3 462 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 SMARCAL1Q9NZC9 954 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 ANGPTL2Q9UKU9 493 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 L1RE1Q9UN81 338 aa8.81□□□□□ -1
NEDD8-207ENST00000533242 SMIM28A0A1B0GU29 152 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 ARNTLO00327 626 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 PODXLO00592 558 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 NRG2O14511 850 aaPredicted RBP8.8□□□□□ -1
NEDD8-207ENST00000533242 CYLC1P35663 651 aaPredicted RBP8.8□□□□□ -1
NEDD8-207ENST00000533242 PPP1R2P41236 205 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 GRM5P41594 1212 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 KIF11P52732 1056 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 VAV2P52735 878 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 YARSP54577 528 aaKnown RBP8.8□□□□□ -1
NEDD8-207ENST00000533242 SLC12A3P55017 1021 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 ARPP19P56211 112 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 MRPS25P82663 173 aaKnown RBP8.8□□□□□ -1
NEDD8-207ENST00000533242 SHC2P98077 582 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 CDK17Q00537 523 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 BRD3Q15059 726 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 ASTE1Q2TB18 679 aaPredicted RBP8.8□□□□□ -1
NEDD8-207ENST00000533242 ATF7IP2Q5U623 682 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 IL31Q6EBC2 164 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 PADI6Q6TGC4 694 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 WDR5BQ86VZ2 330 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 CCDC170Q8IYT3 715 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 ZSCAN18Q8TBC5 510 aaPredicted RBP8.8□□□□□ -1
NEDD8-207ENST00000533242 CCDC42Q96M95 316 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 DRC1Q96MC2 740 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 POLR3CQ9BUI4 534 aaPredicted RBP8.8□□□□□ -1
NEDD8-207ENST00000533242 EHD2Q9NZN4 543 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 AFF4Q9UHB7 1163 aaKnown RBP8.8□□□□□ -1
NEDD8-207ENST00000533242 FBXL5Q9UKA1 691 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 USP20Q9Y2K6 914 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 SAR1BQ9Y6B6 198 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 ACACBO00763 2458 aa8.8□□□□□ -1
NEDD8-207ENST00000533242 ARHGEF35A5YM69 484 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms