RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GRM5P41594 1212 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 NAMPTP43490 491 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 EFNA5P52803 228 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 STK4Q13043 487 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 GPR17Q13304 367 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 IQCB1Q15051 598 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 PPP2R5AQ15172 486 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 LMBRD2Q68DH5 695 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 CC2D1AQ6P1N0 951 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 SLC23A3Q6PIS1 610 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 LPCAT2Q7L5N7 544 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 RASSF3Q86WH2 238 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 HPS3Q969F9 1004 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 CHFRQ96EP1 664 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 CNOT6LQ96LI5 555 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 TPSD1Q9BZJ3 242 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 FBRSL1Q9HCM7 1045 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 SLC39A2Q9NP94 309 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 KCND2Q9NZV8 630 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 PCNX2A6NKB5 2137 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 ASCC3Q8N3C0 2202 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 FRMD3A2A2Y4 597 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 OR6C75A6NL08 312 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 SFI1A8K8P3 1242 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 MAP3K13O43283 966 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 VNN2O95498 520 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 BCKDHBP21953 392 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 HOXD12P35452 270 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 PRCPP42785 496 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 EHHADHQ08426 723 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 PDGFRLQ15198 375 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 CT47A1Q5JQC4 288 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 CENPPQ6IPU0 288 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 LUZP1Q86V48 1076 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 CMTM8Q8IZV2 173 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 SPACA7Q96KW9 195 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 HSFX1Q9UBD0 423 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 TBX20Q9UMR3 447 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 MAPK8IP1Q9UQF2 711 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 TNFSF13BQ9Y275 285 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 NBEAQ8NFP9 2946 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 LAMA1P25391 3075 aa12.16□□□□□ -0.46
TRAPPC4-213ENST00000533149 SMTNL1A8MU46 457 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 BECN2A8MW95 431 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 TK2O00142 265 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 OPHN1O60890 802 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 HIP1RO75146 1068 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 FAM13AO94988 1023 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 EDN1P05305 212 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 GAP43P17677 238 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 ERCC5P28715 1186 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 AVPR1AP37288 418 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 GFPT1Q06210 699 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 BFSP1Q12934 665 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 VEPH1Q14D04 833 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 SPDYCQ5MJ68 293 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 FAM26FQ5R3K3 315 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 L1TD1Q5T7N2 865 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 TRIM68Q6AZZ1 485 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 ANO7Q6IWH7 933 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 KLHL10Q6JEL2 608 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 USP37Q86T82 979 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 DHX40Q8IX18 779 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 CPA6Q8N4T0 437 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 AOPEPQ8N6M6 819 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 CEP76Q8TAP6 659 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 ADAMTS14Q8WXS8 1223 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 BSNDQ8WZ55 320 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 CD101Q93033 1021 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 ZMAT2Q96NC0 199 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 ACAP3Q96P50 834 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 TIPINQ9BVW5 301 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 SLC46A2Q9BY10 475 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 SMG9Q9H0W8 520 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 CRISPLD1Q9H336 500 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 CNTN3Q9P232 1028 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 SLC6A14Q9UN76 642 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 SLC27A5Q9Y2P5 690 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 RAXQ9Y2V3 346 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 THADAQ6YHU6 1953 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 ABCA7Q8IZY2 2146 aa12.15□□□□□ -0.46
TRAPPC4-213ENST00000533149 M0QZQ0 153 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 ALDH1A2O94788 518 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 CFIP05156 583 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 OR4Q2P0C623 313 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 ARSAP15289 507 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 DDX6P26196 483 aaKnown RBP eCLIP12.14□□□□□ -0.473e-7■□□□□ 9.5
TRAPPC4-213ENST00000533149 GJA4P35212 333 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 TUFMP49411 452 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms