RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 PIAS3Q9Y6X2 628 aa24.42■■□□□ 1.5
PPP1CA-207ENST00000532279 PATJQ8NI35 1801 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 ARNTLO00327 626 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 CHADO15335 359 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 TADA3O75528 432 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 SMC2O95347 1197 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 HLA-DRAP01903 254 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 DDX6P26196 483 aaKnown RBP eCLIP24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 PSMC2P35998 433 aaKnown RBP24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 PRCPP42785 496 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 ZNF658Q5TYW1 1059 aaPredicted RBP24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 BPIFB1Q8TDL5 484 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 SMARCE1Q969G3 411 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 MYRFLQ96LU7 910 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 GSDMAQ96QA5 445 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 BCO2Q9BYV7 579 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 SDCBP2Q9H190 292 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 TRPC7Q9HCX4 862 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 OBP2AQ9NY56 170 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 ZMYM5Q9UJ78 669 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 NDRG2Q9UN36 371 aaKnown RBP24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 MRPS17Q9Y2R5 130 aaKnown RBP24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 PCDHA5Q9Y5H7 936 aa24.41■■□□□ 1.5
PPP1CA-207ENST00000532279 MYH10P35580 1976 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 SHISA7A6NL88 538 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 TRIM66O15016 1216 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 WEE1P30291 646 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 GCLMP48507 274 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 EDRF1Q3B7T1 1238 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 SPOPLQ6IQ16 392 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 CELF5Q8N6W0 485 aaKnown RBP24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 TTC8Q8TAM2 541 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 TIGD1Q96MW7 591 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 OSBPL6Q9BZF3 934 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 ZNF518BQ9C0D4 1074 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 HOOK1Q9UJC3 728 aaKnown RBP24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 CCL26Q9Y258 94 aa24.4■■□□□ 1.5
PPP1CA-207ENST00000532279 CACNA1HO95180 2353 aa24.39■■□□□ 1.5
PPP1CA-207ENST00000532279 F8VP50 259 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 CLDN5O00501 218 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 MAN2B1O00754 1011 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 P4HA1P13674 534 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 PPP3CAQ08209 521 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 ARHGAP29Q52LW3 1261 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 MON1AQ86VX9 555 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 FAM3CQ92520 227 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 USP13Q92995 863 aaPredicted RBP24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 SPATA17Q96L03 361 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 NELL2Q99435 816 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 B3GNT5Q9BYG0 378 aa24.39■■□□□ 1.49
PPP1CA-207ENST00000532279 ASS1P00966 412 aaKnown RBP24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 CCNE1P24864 410 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 KPNA1P52294 538 aaPredicted RBP24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 CACNA2D1P54289 1103 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 USP46P62068 366 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 DENND5BQ6ZUT9 1274 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 C1orf210Q8IVY1 113 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 TAS1R2Q8TE23 839 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 TAF4BQ92750 862 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 MED10Q9BTT4 135 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 IMPG2Q9BZV3 1241 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 ELOVL4Q9GZR5 314 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 SPATA6Q9NWH7 488 aaPredicted RBP24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 GTSE1Q9NYZ3 720 aa24.38■■□□□ 1.49
PPP1CA-207ENST00000532279 CACNA1IQ9P0X4 2223 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 CETN3O15182 167 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 NCAM2O15394 837 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 EPB41P11171 864 aaKnown RBP24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 SOX9P48436 509 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 ORC1Q13415 861 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 ISM2Q6H9L7 571 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 ACOT1Q86TX2 421 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 TTC16Q8NEE8 873 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 SPATA20Q8TB22 786 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 TNIP3Q96KP6 325 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 CYP2S1Q96SQ9 504 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 TSG101Q99816 390 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 TDP1Q9NUW8 608 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 TMEM30AQ9NV96 361 aa24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 THG1LQ9NWX6 298 aaKnown RBP24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 CIZ1Q9ULV3 898 aaPredicted RBP24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 HELZP42694 1942 aaKnown RBP24.37■■□□□ 1.49
PPP1CA-207ENST00000532279 KINO60870 393 aaKnown RBP24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 GADD45BO75293 160 aaPredicted RBP24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 ASPAP45381 313 aa24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 NOP14P78316 857 aaKnown RBP24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 TNK2Q07912 1038 aa24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 IFRD2Q12894 506 aaPredicted RBP24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 FRMD5Q7Z6J6 570 aa24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 CLDN23Q96B33 292 aa24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 C8orf48Q96LL4 319 aa24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 CEP295NLQ96MC4 621 aa24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 SLC22A12Q96S37 553 aa24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 HMGXB4Q9UGU5 601 aa24.36■■□□□ 1.49
PPP1CA-207ENST00000532279 F5P12259 2224 aa24.35■■□□□ 1.49
PPP1CA-207ENST00000532279 TRAV19A0A0A6YYK7 116 aa24.35■■□□□ 1.49
PPP1CA-207ENST00000532279 C2orf78A6NCI8 922 aa24.35■■□□□ 1.49
PPP1CA-207ENST00000532279 TRIM49BA6NDI0 452 aa24.35■■□□□ 1.49
PPP1CA-207ENST00000532279 SOBPA7XYQ1 873 aa24.35■■□□□ 1.49
PPP1CA-207ENST00000532279 NBL1P41271 181 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms