RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 DSEQ9UL01 958 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 IPPQ9Y573 584 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 A8MXQ7 604 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 MEFVO15553 781 aaPredicted RBP12.92□□□□□ -0.34
CHD7-211ENST00000532149 DAPK3O43293 454 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 THP07101 528 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 COL6A1P12109 1028 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 RARGP13631 454 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
CHD7-211ENST00000532149 CDH8P55286 799 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 BEX3Q00994 111 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 SIX1Q15475 284 aaPredicted RBP12.92□□□□□ -0.34
CHD7-211ENST00000532149 TAZQ16635 292 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 DEFB115Q30KQ5 88 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 PTPN20Q4JDL3 420 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 PKDCCQ504Y2 493 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 FAM47CQ5HY64 1035 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 UBXN11Q5T124 520 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 HOOK3Q86VS8 718 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 RELL1Q8IUW5 271 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 CMASQ8NFW8 434 aaPredicted RBP12.92□□□□□ -0.34
CHD7-211ENST00000532149 SLC35F5Q8WV83 523 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 TRIB2Q92519 343 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 C18orf25Q96B23 403 aaPredicted RBP12.92□□□□□ -0.34
CHD7-211ENST00000532149 SNF8Q96H20 258 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 BTBD6Q96KE9 485 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 TRIM62Q9BVG3 475 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 ROPN1BQ9BZX4 212 aaPredicted RBP12.92□□□□□ -0.34
CHD7-211ENST00000532149 DCLK3Q9C098 648 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 SDCBP2Q9H190 292 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 PPCSQ9HAB8 311 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 ROPN1Q9HAT0 212 aaPredicted RBP12.92□□□□□ -0.34
CHD7-211ENST00000532149 SRRDQ9UH36 339 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 ADAM21Q9UKJ8 722 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 TSPAN16Q9UKR8 245 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 CDY2AQ9Y6F7 541 aa12.92□□□□□ -0.34
CHD7-211ENST00000532149 GOLGA6CA6NDK9 693 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 SRRM3A6NNA2 597 aaPredicted RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 RNF40O75150 1001 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 ITGAVP06756 1048 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 NUDT17P0C025 328 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 MYZAPP0CAP1 466 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 GOLGA6DP0CG33 693 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 RALAP11233 206 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 ZFXP17010 805 aaPredicted RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 GPD1P21695 349 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 RFC1P35251 1148 aaPredicted RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 GGCXP38435 758 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 ZNF135P52742 658 aaPredicted RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 LILRA4P59901 499 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 RPL7AP62424 266 aaKnown RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 SLC6A3Q01959 620 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 CACNB2Q08289 660 aaPredicted RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 TMEM62Q0P6H9 643 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 EFHC1Q5JVL4 640 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 ZFYVE27Q5T4F4 411 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 MAP3K21Q5TCX8 1036 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 SPOCD1Q6ZMY3 1216 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 TMC3Q7Z5M5 1100 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 FAM228AQ86W67 206 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 TRPV1Q8NER1 839 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 OR6B3Q8NGW1 331 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 FAM76AQ8TAV0 307 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 ART4Q93070 314 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 NKD2Q969F2 451 aaPredicted RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 ZMAT2Q96NC0 199 aaKnown RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 SLITRK1Q96PX8 696 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 PPP1R10Q96QC0 940 aaKnown RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 CPXM1Q96SM3 734 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 PPP1R16BQ96T49 567 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 PABPC3Q9H361 631 aaKnown RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 NXF3Q9H4D5 531 aaKnown RBP12.91□□□□□ -0.34
CHD7-211ENST00000532149 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 ZDHHC18Q9NUE0 388 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 FAM105AQ9NUU6 356 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 GOLGA6AQ9NYA3 693 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 RRN3Q9NYV6 651 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 ST3GAL5Q9UNP4 418 aa12.91□□□□□ -0.34
CHD7-211ENST00000532149 SYF2O95926 243 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 EOMESO95936 686 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 KRT1P04264 644 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 ASGR1P07306 291 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 CFHP08603 1231 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 PCSK1P29120 753 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 ECHS1P30084 290 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 STIP1P31948 543 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 PTPN9P43378 593 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 MARCKSL1P49006 195 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 AIF1P55008 147 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 MGAT3Q09327 533 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 BYSLQ13895 437 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 MAPRE1Q15691 268 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 SOWAHAQ2M3V2 549 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 FAM102AQ5T9C2 384 aaPredicted RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 AGBL2Q5U5Z8 902 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 CCSAPQ6IQ19 270 aaPredicted RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 BBS12Q6ZW61 710 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 BZW1Q7L1Q6 419 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms