RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 PPP1R2P41236 205 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 CASP4P49662 377 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 CLDN10P78369 228 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 EDRF1Q3B7T1 1238 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 ITPRIPL2Q3MIP1 535 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 ZACNQ401N2 412 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 SDHAF4Q5VUM1 108 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 RALGPS2Q86X27 583 aaPredicted RBP13.4□□□□□ -0.26
C11orf54-210ENST00000531516 B3GALNT2Q8NCR0 500 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 PCED1BQ96HM7 432 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 CHAMP1Q96JM3 812 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 PKMYT1Q99640 499 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 SLC46A2Q9BY10 475 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 GOLPH3LQ9H4A5 285 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 FBXO4Q9UKT5 387 aa13.4□□□□□ -0.26
C11orf54-210ENST00000531516 ATP2C2O75185 946 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-210ENST00000531516 C4BPAP04003 597 aaKnown RBP13.39□□□□□ -0.27
C11orf54-210ENST00000531516 CCNE1P24864 410 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
C11orf54-210ENST00000531516 GPR15P49685 360 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 NRLP54845 237 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 NR1H3Q13133 447 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 ZNF268Q14587 947 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-210ENST00000531516 PDGFRLQ15198 375 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 DGKKQ5KSL6 1271 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 TXNDC8Q6A555 127 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 SCARA5Q6ZMJ2 495 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 FRMD5Q7Z6J6 570 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 GPIHBP1Q8IV16 184 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 TTC39CQ8N584 583 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 STKLD1Q8NE28 680 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 PDZD8Q8NEN9 1154 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 ATRIPQ8WXE1 791 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 CLDN23Q96B33 292 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 C8orf48Q96LL4 319 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 TIGD1Q96MW7 591 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 MKNK1Q9BUB5 465 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 XYLT2Q9H1B5 865 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 CRTAC1Q9NQ79 661 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 DLGAP2Q9P1A6 1054 aa13.39□□□□□ -0.27
C11orf54-210ENST00000531516 DOCK8Q8NF50 2099 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 F8VP50 259 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 ABL1P00519 1130 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 HDCP19113 662 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 GTF2H1P32780 548 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 IFNAR2P48551 515 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 NOP14P78316 857 aaKnown RBP13.38□□□□□ -0.27
C11orf54-210ENST00000531516 ZNF528Q3MIS6 628 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 WDR44Q5JSH3 913 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-210ENST00000531516 SV2AQ7L0J3 742 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 UNC93AQ86WB7 457 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 FMR1NBQ8N0W7 255 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-210ENST00000531516 CPA6Q8N4T0 437 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 TTC16Q8NEE8 873 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 SMARCD1Q96GM5 515 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 FAM126AQ9BYI3 521 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-210ENST00000531516 SMYD3Q9H7B4 428 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 LMAN1LQ9HAT1 526 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 GKN1Q9NS71 199 aa13.38□□□□□ -0.27
C11orf54-210ENST00000531516 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-210ENST00000531516 SPECC1L-ADORA2AF8WAN1 911 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 NRG2O14511 850 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-210ENST00000531516 PSMA7O14818 248 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 HCRTO43612 131 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 LRRN2O75325 713 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 PRAMEF12O95522 483 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 HLA-DRAP01903 254 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 LMNAP02545 664 aaKnown RBP13.37□□□□□ -0.27
C11orf54-210ENST00000531516 SP9P0CG40 484 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 CCR3P51677 355 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 FKBP3Q00688 224 aaKnown RBP13.37□□□□□ -0.27
C11orf54-210ENST00000531516 CSTF1Q05048 431 aaKnown RBP13.37□□□□□ -0.27
C11orf54-210ENST00000531516 PNOCQ13519 176 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 RUNX3Q13761 415 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 KRT39Q6A163 491 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 POTEHQ6S545 545 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 NUP93Q8N1F7 819 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 SYNPOQ8N3V7 929 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 SECISBP2LQ93073 1101 aaKnown RBP13.37□□□□□ -0.27
C11orf54-210ENST00000531516 ATP2A3Q93084 1043 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 MMRN2Q9H8L6 949 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 CYP3A43Q9HB55 503 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 TMEM8AQ9HCN3 771 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 DMAP1Q9NPF5 467 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-210ENST00000531516 MTF2Q9Y483 593 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-210ENST00000531516 WDFY4Q6ZS81 3184 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 PIEZO1Q92508 2521 aa13.37□□□□□ -0.27
C11orf54-210ENST00000531516 KMT2EQ8IZD2 1858 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 SCN1AP35498 2009 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 ARNTLO00327 626 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 AKAP3O75969 853 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 ASS1P00966 412 aaKnown RBP13.36□□□□□ -0.27
C11orf54-210ENST00000531516 YWHAQP27348 245 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 CTHP32929 405 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 GCLMP48507 274 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms