RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TTLL12Q14166 644 aaPredicted RBP18.07■□□□□ 0.48
BRCA2-204ENST00000530893 TMEM63BQ5T3F8 832 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 TRABD2AQ86V40 505 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 GBP7Q8N8V2 638 aaPredicted RBP18.07■□□□□ 0.48
BRCA2-204ENST00000530893 PPTC7Q8NI37 304 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 ZC3H15Q8WU90 426 aaKnown RBP18.07■□□□□ 0.48
BRCA2-204ENST00000530893 GRAMD1AQ96CP6 724 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 FDXACB1Q9BRP7 624 aaPredicted RBP18.07■□□□□ 0.48
BRCA2-204ENST00000530893 ELOVL4Q9GZR5 314 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 PNMA3Q9UL41 463 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 BARX2Q9UMQ3 279 aaPredicted RBP18.07■□□□□ 0.48
BRCA2-204ENST00000530893 SLC12A4Q9UP95 1085 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 PRPF4O43172 522 aaKnown RBP eCLIP18.06■□□□□ 0.48
BRCA2-204ENST00000530893 IFNB1P01574 187 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 IL9RQ01113 521 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 MPP2Q14168 576 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 TMEM132DQ14C87 1099 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 STILQ15468 1287 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 HIF1AQ16665 826 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 SLC10A6Q3KNW5 377 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 NUGGCQ68CJ6 796 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 CHADLQ6NUI6 762 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 KIAA0319LQ8IZA0 1049 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 KCTD6Q8NC69 237 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 HAUS1Q96CS2 278 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 HPDLQ96IR7 371 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 TWNKQ96RR1 684 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 RSAD1Q9HA92 442 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 TJP2Q9UDY2 1190 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 SMG5Q9UPR3 1016 aaKnown RBP18.06■□□□□ 0.48
BRCA2-204ENST00000530893 RBM47A0AV96 593 aaKnown RBP18.06■□□□□ 0.48
BRCA2-204ENST00000530893 GCAP28676 217 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 PHBP35232 272 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 ZNF143P52747 638 aaPredicted RBP18.06■□□□□ 0.48
BRCA2-204ENST00000530893 IGBP1P78318 339 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 CCNA1P78396 465 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 RBP5P82980 135 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 TMED2Q15363 201 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 SPRED3Q2MJR0 410 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 SMTNL2Q2TAL5 461 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 ZBED8Q8IZ13 594 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 RSAD2Q8WXG1 361 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 SLC40A1Q9NP59 571 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 KLC4Q9NSK0 619 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 FGFR1OP2Q9NVK5 253 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 AKT3Q9Y243 479 aa18.06■□□□□ 0.48
BRCA2-204ENST00000530893 M0QYV0 167 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 TSHRP16473 764 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 ARF4P18085 180 aaPredicted RBP18.05■□□□□ 0.48
BRCA2-204ENST00000530893 MIPP30301 263 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 CTCFP49711 727 aaPredicted RBP18.05■□□□□ 0.48
BRCA2-204ENST00000530893 ARL4CP56559 192 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 PDIA2Q13087 525 aaKnown RBP18.05■□□□□ 0.48
BRCA2-204ENST00000530893 KCNT1Q5JUK3 1230 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 TAPT1Q6NXT6 567 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 USP50Q70EL3 339 aaPredicted RBP18.05■□□□□ 0.48
BRCA2-204ENST00000530893 TGS1Q96RS0 853 aaKnown RBP18.05■□□□□ 0.48
BRCA2-204ENST00000530893 ADPGKQ9BRR6 497 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 USP18Q9UMW8 372 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.05■□□□□ 0.48
BRCA2-204ENST00000530893 TRUB2O95900 331 aaKnown RBP18.05■□□□□ 0.48
BRCA2-204ENST00000530893 DYNLT1P63172 113 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 SNAPC2Q13487 334 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 ZNF792Q3KQV3 632 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 LCLAT1Q6UWP7 414 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 EMC1Q8N766 993 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 NAT8LQ8N9F0 302 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 ZBTB10Q96DT7 871 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 HEXIM2Q96MH2 286 aaKnown RBP18.05■□□□□ 0.48
BRCA2-204ENST00000530893 CNPY3Q9BT09 278 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 VPS37BQ9H9H4 285 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 HMGXB4Q9UGU5 601 aa18.05■□□□□ 0.48
BRCA2-204ENST00000530893 UTRNP46939 3433 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 E7ESA3 106 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 MCF2LO15068 1137 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 ENDOD1O94919 500 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 STIP1P31948 543 aaKnown RBP18.04■□□□□ 0.48
BRCA2-204ENST00000530893 FASTKD3Q14CZ7 662 aaKnown RBP18.04■□□□□ 0.48
BRCA2-204ENST00000530893 ZC3H12AQ5D1E8 599 aaKnown RBP18.04■□□□□ 0.48
BRCA2-204ENST00000530893 FAM102AQ5T9C2 384 aaPredicted RBP18.04■□□□□ 0.48
BRCA2-204ENST00000530893 ICE2Q659A1 982 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 MOB2Q70IA6 237 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 SPATA21Q7Z572 469 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 ZNF467Q7Z7K2 595 aaPredicted RBP18.04■□□□□ 0.48
BRCA2-204ENST00000530893 ATP11CQ8NB49 1132 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 CPT1BQ92523 772 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 ACAP3Q96P50 834 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 SSU72Q9NP77 194 aaKnown RBP18.04■□□□□ 0.48
BRCA2-204ENST00000530893 PSMC3IPQ9P2W1 217 aaPredicted RBP18.04■□□□□ 0.48
BRCA2-204ENST00000530893 AGAP1Q9UPQ3 857 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 ARL2BPQ9Y2Y0 163 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 PLXNA1Q9UIW2 1896 aa18.04■□□□□ 0.48
BRCA2-204ENST00000530893 A0A1B0GUA9 196 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 GPD1P21695 349 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 FAM47CQ5HY64 1035 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 EFHC2Q5JST6 749 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 MTHFD1LQ6UB35 978 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 RGS9BPQ6ZS82 235 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 RFX6Q8HWS3 928 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 FUKQ8N0W3 1084 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms