RNA–Protein interactions for RNA: ENST00000530843.1

NUP214-223, Transcript of nucleoporin 214, human

TSL 5

Gene NUP214, Length 189 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP214-223	ENST00000530843	GOLGA6A	Q9NYA3	693 aa		4.7	□□□□□ -1.66
NUP214-223	ENST00000530843	COL20A1	Q9P218	1284 aa		4.7	□□□□□ -1.66
NUP214-223	ENST00000530843	TPCN1	Q9ULQ1	816 aa		4.7	□□□□□ -1.66
NUP214-223	ENST00000530843	TRIM43B	A6NCK2	446 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	SLC16A3	O15427	465 aa	Known RBP	4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ORC4	O43929	436 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	TTLL1	O95922	423 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	HMGB1	P09429	215 aa	Known RBP	4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	CYP2C9	P11712	490 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	RHCE	P18577	417 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	WT1	P19544	449 aa	Predicted RBP	4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	KCNA3	P22001	575 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	LRPAP1	P30533	357 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	DGKE	P52429	567 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ATXN1	P54253	815 aa	Known RBP	4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	CACNB3	P54284	484 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ELL	P55199	621 aa	Predicted RBP	4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	FMO1	Q01740	532 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	RHD	Q02161	417 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	RAB32	Q13637	225 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	E2F2	Q14209	437 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	PTCHD3	Q3KNS1	767 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	PLA1A	Q53H76	456 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ZNF618	Q5T7W0	954 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	DEPDC1	Q5TB30	811 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	DPY19L2P1	Q6NXN4	242 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ZNF551	Q7Z340	670 aa	Predicted RBP	4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	AMIGO2	Q86SJ2	522 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ZNF384	Q8TF68	577 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ATRIP	Q8WXE1	791 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	SARAF	Q96BY9	339 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	HAPLN3	Q96S86	360 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ZNF518B	Q9C0D4	1074 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	ARHGEF3	Q9NR81	526 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	DLL3	Q9NYJ7	618 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	PTGFRN	Q9P2B2	879 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843	PCDHGB6	Q9Y5F9	930 aa		4.69	□□□□□ -1.66
NUP214-223	ENST00000530843		A1L4Q6	167 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	ISM1	B1AKI9	464 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843		H0YIZ8	118 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	TLR5	O60602	858 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	PPFIA2	O75334	1257 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	VNN1	O95497	513 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	FES	P07332	822 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	DRD4	P21917	467 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	PEX2	P28328	305 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	RPS16	P62249	146 aa	Known RBP	4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	KRT17	Q04695	432 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	SEMA5A	Q13591	1074 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	POLD3	Q15054	466 aa	Predicted RBP	4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	LY6K	Q17RY6	165 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	SLC15A3	Q8IY34	581 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	BPIFB1	Q8TDL5	484 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	NMD3	Q96D46	503 aa	Known RBP	4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	APIP	Q96GX9	242 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	SUCLG2	Q96I99	432 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	A1CF	Q9NQ94	594 aa	Known RBP	4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	PRDM11	Q9NQV5	511 aa		4.68	□□□□□ -1.66
NUP214-223	ENST00000530843	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	MBD3L3	A6NE82	208 aa	Predicted RBP	4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	PYCARD-AS1	I3L0S3	204 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	GOLIM4	O00461	696 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	ZNF213	O14771	459 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	NXPH3	O95157	252 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	XRCC6	P12956	609 aa	Known RBP eCLIP	4.67	□□□□□ -1.66	1e-7	■■■□□ 18.3
NUP214-223	ENST00000530843	GPD1	P21695	349 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	FBL	P22087	321 aa	Known RBP	4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	CCT8	P50990	548 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	PDE6C	P51160	858 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	FAM193A	P78312	1265 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	NHLH1	Q02575	133 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	MGAT5B	Q3V5L5	792 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	TEDDM1	Q5T9Z0	273 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	DARS2	Q6PI48	645 aa	Known RBP	4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	KCTD20	Q7Z5Y7	419 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	ABRA	Q8N0Z2	381 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	TMEM171	Q8WVE6	324 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	R3HDM4	Q96D70	268 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	APOL5	Q9BWW9	433 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	GLOD4	Q9HC38	313 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	CHPF2	Q9P2E5	772 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	SERGEF	Q9UGK8	458 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	AFF4	Q9UHB7	1163 aa	Known RBP	4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	SNX14	Q9Y5W7	946 aa		4.67	□□□□□ -1.66
NUP214-223	ENST00000530843	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	PROP1	O75360	226 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	RBMXL2	O75526	392 aa	Known RBP	4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	MAP4K4	O95819	1239 aa	Predicted RBP	4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	IL1R1	P14778	569 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	ZKSCAN1	P17029	563 aa	Predicted RBP	4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	PLAC9	Q5JTB6	97 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	COLEC12	Q5KU26	742 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	ZNF788	Q6ZQV5	615 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	DGKH	Q86XP1	1220 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	PPP2R3C	Q969Q6	453 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	SPSB4	Q96A44	273 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	REPS1	Q96D71	796 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	STK31	Q9BXU1	1019 aa		4.66	□□□□□ -1.66
NUP214-223	ENST00000530843	LRRC27	Q9C0I9	530 aa		4.66	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms