RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 IMPG2Q9BZV3 1241 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 TMOD3Q9NYL9 352 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 C11orf21Q9P2W6 132 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 PLEKHG2Q9H7P9 1386 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 MYADML2A6NDP7 307 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 FTLP02792 175 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-213ENST00000530784 AKAP5P24588 427 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 SEC24CP53992 1094 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 BLOC1S1P78537 153 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 NOGQ13253 232 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 PGS1Q32NB8 556 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 KRTAP15-1Q3LI76 137 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 THEMIS2Q5TEJ8 643 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 SLC44A3Q8N4M1 653 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 NSUN7Q8NE18 718 aaKnown RBP8.7□□□□□ -1.02
CSDE1-213ENST00000530784 NUP88Q99567 741 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-213ENST00000530784 TBCCD1Q9NVR7 557 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 SIDT1Q9NXL6 827 aaKnown RBP8.7□□□□□ -1.02
CSDE1-213ENST00000530784 POLKQ9UBT6 870 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
CSDE1-213ENST00000530784 KAT6BQ8WYB5 2073 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 SLC16A6O15403 523 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 PHKG2P15735 406 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 FDXRP22570 491 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 CYP2C19P33261 490 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 TNNT2P45379 298 aaPredicted RBP8.69□□□□□ -1.02
CSDE1-213ENST00000530784 MAP2K6P52564 334 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 HK3P52790 923 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 EIF4A2Q14240 407 aaKnown RBP8.69□□□□□ -1.02
CSDE1-213ENST00000530784 HEATR3Q7Z4Q2 680 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 CFAP52Q8N1V2 620 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 AOPEPQ8N6M6 819 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 PDPRQ8NCN5 879 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 C1orf43Q9BWL3 253 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 CTTNBP2NLQ9P2B4 639 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 CLSPNQ9HAW4 1339 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 ATP10DQ9P241 1426 aa8.69□□□□□ -1.02
CSDE1-213ENST00000530784 ITGB4P16144 1822 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 PRSS29PA6NIE9 313 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 ARIH2O95376 493 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 VCAM1P19320 739 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 PRDX5P30044 214 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 RAB27AP51159 221 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 ZNF844Q08AG5 666 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 PIN1Q13526 163 aaPredicted RBP8.68□□□□□ -1.02
CSDE1-213ENST00000530784 SMIM5Q71RC9 77 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 COLGALT2Q8IYK4 626 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 MVB12AQ96EY5 273 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 PTCD3Q96EY7 689 aaKnown RBP8.68□□□□□ -1.02
CSDE1-213ENST00000530784 LRIG1Q96JA1 1093 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 RHOBTB2Q9BYZ6 727 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 BRD9Q9H8M2 597 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 CASS4Q9NQ75 786 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 ABCF2Q9UG63 623 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 ASAP1Q9ULH1 1129 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 IGSF1Q8N6C5 1336 aa8.68□□□□□ -1.02
CSDE1-213ENST00000530784 E9PLN8 166 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 AKAP10O43572 662 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 MAST3O60307 1309 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 ANXA1P04083 346 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 GJB1P08034 283 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 CT47B1P0C2W7 299 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-213ENST00000530784 KCNA2P16389 499 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 KDRP35968 1356 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 MPLP40238 635 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 INHBEP58166 350 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 PSMC1P62191 440 aaKnown RBP8.67□□□□□ -1.02
CSDE1-213ENST00000530784 ITPK1Q13572 414 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 UBR3Q6ZT12 1888 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 FAM90A1Q86YD7 464 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 PDSS2Q86YH6 399 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 HPS3Q969F9 1004 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 VKORC1Q9BQB6 163 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 SLAMF7Q9NQ25 335 aa8.67□□□□□ -1.02
CSDE1-213ENST00000530784 GNL3LQ9NVN8 582 aaKnown RBP8.67□□□□□ -1.02
CSDE1-213ENST00000530784 MAP2P11137 1827 aaKnown RBP8.66□□□□□ -1.02
CSDE1-213ENST00000530784 ADCY9O60503 1353 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 PRAMEF33A0A0G2JMD5 474 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 A0A1W2PS29 197 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 PRAMEF10O60809 474 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 ESRRBO95718 433 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 HSP90AB1P08238 724 aaKnown RBP8.66□□□□□ -1.02
CSDE1-213ENST00000530784 GNAI3P08754 354 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 FTH1P19P0C7X4 201 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 PLA2G5P39877 138 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 PHKA1P46020 1223 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 PIK3CGP48736 1102 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 GNAI1P63096 354 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 MPP3Q13368 585 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 SMN1Q16637 294 aaKnown RBP8.66□□□□□ -1.02
CSDE1-213ENST00000530784 SP5Q6BEB4 398 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-213ENST00000530784 CLNKQ7Z7G1 428 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 SH2D3CQ8N5H7 860 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 JPH3Q8WXH2 748 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-213ENST00000530784 RTFDC1Q9BY42 306 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-213ENST00000530784 PCGF6Q9BYE7 350 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 WDCPQ9H6R7 721 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 LMBRD1Q9NUN5 540 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 ZNF180Q9UJW8 692 aa8.66□□□□□ -1.02
CSDE1-213ENST00000530784 SALL3Q9BXA9 1300 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms