RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 LCLAT1Q6UWP7 414 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 RNF19BQ6ZMZ0 732 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 KIAA1328Q86T90 577 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ZNF677Q86XU0 584 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 WDTC1Q8N5D0 677 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 FAM124BQ9H5Z6 455 aaPredicted RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 SLC28A3Q9HAS3 691 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 MRPL17Q9NRX2 175 aaKnown RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 MTRRQ9UBK8 725 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 PPP2R2CQ9Y2T4 447 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 WDR27A2RRH5 827 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 EIF3CLB5ME19 914 aaKnown RBP11.27□□□□□ -0.61
SOX6-213ENST00000530378 GJB6O95452 261 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 VNN2O95498 520 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 ABL1P00519 1130 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 SPATA31D3P0C874 917 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 FAM200BP0CF97 657 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 BMP8BP34820 402 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 MAGEA1P43355 309 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 NSFP46459 744 aaKnown RBP11.27□□□□□ -0.61
SOX6-213ENST00000530378 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 GPM6BQ13491 265 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 ARHGAP17Q68EM7 881 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 FAM171BQ6P995 826 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 SPATA31D4Q6ZUB0 917 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 SCN4BQ8IWT1 228 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 SPATA18Q8TC71 538 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 SPPL3Q8TCT6 385 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 GPR152Q8TDT2 470 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 KCNK16Q96T55 309 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 EIF3CQ99613 913 aaKnown RBP11.27□□□□□ -0.61
SOX6-213ENST00000530378 SEPT5Q99719 369 aaPredicted RBP11.27□□□□□ -0.61
SOX6-213ENST00000530378 HNRNPABQ99729 332 aaKnown RBP11.27□□□□□ -0.61
SOX6-213ENST00000530378 CLSTN3Q9BQT9 956 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 C11orf84Q9BUA3 381 aaPredicted RBP11.27□□□□□ -0.61
SOX6-213ENST00000530378 DNAI2Q9GZS0 605 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 CRISPLD1Q9H336 500 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 LZTFL1Q9NQ48 299 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 TLR9Q9NR96 1032 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 NENFQ9UMX5 172 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 PCDHGC3Q9UN70 934 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 ZKSCAN5Q9Y2L8 839 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 RWDD3Q9Y3V2 267 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 PCDHA13Q9Y5I0 950 aa11.27□□□□□ -0.61
SOX6-213ENST00000530378 MTMR11A4FU01 709 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 OR6C75A6NL08 312 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 TEX28O15482 410 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 TBC1D4O60343 1298 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 CXCL14O95715 111 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 FTLP02792 175 aaPredicted RBP11.26□□□□□ -0.61
SOX6-213ENST00000530378 CYP1A1P04798 512 aaPredicted RBP11.26□□□□□ -0.61
SOX6-213ENST00000530378 CCDC175P0C221 793 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 FAM163BP0C2L3 166 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 CTSAP10619 480 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 UNGP13051 313 aaPredicted RBP11.26□□□□□ -0.61
SOX6-213ENST00000530378 NPR3P17342 541 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 BCAT1P54687 386 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 GALCP54803 685 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 ERVK-21P61565 698 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 ADCY1Q08828 1119 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 PDCLQ13371 301 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 PTPN20Q4JDL3 420 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 PMF1Q6P1K2 205 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 CLEC20AQ6ZU45 233 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 GPRIN1Q7Z2K8 1008 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 DCP1BQ8IZD4 617 aaKnown RBP11.26□□□□□ -0.61
SOX6-213ENST00000530378 TMEM35BQ8NCS4 154 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 TIFAQ96CG3 184 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 ZNF653Q96CK0 615 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 ARHGEF26Q96DR7 871 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 SMARCD1Q96GM5 515 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 CPXM1Q96SM3 734 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 SMOQ99835 787 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 SYNCQ9H7C4 482 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 MYO1AQ9UBC5 1043 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 KIAA1257Q9ULG3 409 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 EYSQ5T1H1 3165 aa11.26□□□□□ -0.61
SOX6-213ENST00000530378 ZNF638Q14966 1978 aaKnown RBP11.26□□□□□ -0.61
SOX6-213ENST00000530378 E5RJQ4 531 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 F8VP50 259 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 GOLGA8SH3BPF8 625 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 HAX1O00165 279 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 LCA5LO95447 670 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 ERBB2P04626 1255 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 CNPP09543 421 aaKnown RBP11.25□□□□□ -0.61
SOX6-213ENST00000530378 LCP1P13796 627 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 GRIK1P39086 918 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 GPD2P43304 727 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 CENPCQ03188 943 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 BST2Q10589 180 aaKnown RBP11.25□□□□□ -0.61
SOX6-213ENST00000530378 CAMK1Q14012 370 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 DDR2Q16832 855 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 PKDCCQ504Y2 493 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 TRIM72Q6ZMU5 477 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 C4orf50Q6ZRC1 276 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms